Escherichia coli O26 H11 11368 (EHEC): ECO26_4678
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Entry
ECO26_4678 CDS
T01098
Symbol
rhaR
Name
(GenBank) DNA-binding transcriptional activator RhaR, L-rhamnose-binding
KO
K02854
AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
Organism
eoj
Escherichia coli O26:H11 11368 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoj03000
]
ECO26_4678 (rhaR)
Transcription factors [BR:
eoj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECO26_4678 (rhaR)
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Gene cluster
GFIT
Motif
Pfam:
AraC_binding
HTH_18
HTH_AraC
Cupin_2
ARD
Motif
Other DBs
NCBI-ProteinID:
BAI27843
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All DBs
Position
complement(4675665..4676603)
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AA seq
312 aa
AA seq
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MVFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQHV
FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC
PERLKLNLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVPFANEMAEL
LFGQLAMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR
QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT
PSQWRHLNSQKD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggttttctgcaataacgcgaatcttctcaacgtatttgtacgccatattgcgaataat
caacttcgttctctggccgaggtagccacggtggcgcatcagttaaaacttctcaaagat
gatttttttgccagcgaccagcaggcagtcgctgtggctgaccgttatccgcaacatgtc
tttgctgaacatacacatgatttttgtgagctggtgattgtctggcgcggtaatggcctg
catgtactcaacgatcgcccttatcgcattacccgtggcgatctcttttacattcatgct
gacgataaacactcctacgcttccgttaacgatctggttttgcagaatattatttattgc
ccggagcggctgaagctgaatcttgactggcagggggcgattccgggatttagcgccagc
gcagggcaaccacactggcgcttaggtagcgtggggatggcgcaggcgcggcaggttatc
ggtcagcttgagcatgaaagtagtcagcatgtgccgtttgctaacgaaatggcagagttg
ctgttcgggcagttggcgatgttgctgaatcgccatcgttacaccagtgattcgttgccg
ccaacatccagcgaaacgttgctggataagctgattacccggctggcggctagcctgaaa
agtccctttgcgctggataaattttgtgatgaggcatcgtgcagtgagcgcgttttgcgt
cagcaatttcgccagcagactggaatgaccatcaatcaatatctgcgacaggtcagagtg
tgtcatgcgcaatatcttctccagcatagccgcctgttaatcagtgatatttcgaccgaa
tgtggctttgaagatagtaactatttttcggtggtgtttacccgggaaaccgggatgacg
cccagccagtggcgtcatctcaattcgcagaaagattaa
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