Escherichia coli O55 H7 CB9615 (EPEC): G2583_3158
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Entry
G2583_3158 CDS
T01190
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
3.6.4.13
]
Organism
eok
Escherichia coli O55:H7 CB9615 (EPEC)
Brite
KEGG Orthology (KO) [BR:
eok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eok03009
]
G2583_3158 (srmB)
Ribosome biogenesis [BR:
eok03009
]
Prokaryotic type
rRNA helicases
G2583_3158 (srmB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADD57686
LinkDB
All DBs
Position
3215817..3217151
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTTEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccgcgtaagaaatccggtccgccgcgtattttg
atcctcaccccaactcgcgagctggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatctggatatcgccaccatcaccggcggcgtagcctatatgaaccacgcg
gaagtgttcagcgaaaatcaggacatcgtggtcgccacgaccggacgtctgctgcaatac
ataaaagaagagaacttcgattgccgcgcggttgaaacgctgatcctcgacgaagcagac
cgtatgctggatatgggcttcgctcaggatatcgaacatattgctggcgaaacgcgctgg
cgtaaacagaccctgctcttttcggcaacgctggaaggcgatgcgattcaggactttgcc
gagcgtctgctggaagatccggtggaggtttctgccaatccgtccacccgtgagcgcaaa
aaaattcatcagtggtattaccgcgccgatgacctggaacataaaaccgcattgctggtg
catctgttaaaacagccggaagcgacccgctcaattgtgtttgtgcgtaagcgtgagcgt
gtgcatgagctggcaaactggctgcgcgaagcgggcatcaacaactgctatctcgaaggt
gagatggtacagggcaagcgtaacgaagcgatcaaacgtttgaccgaaggtcgcgtaaac
gtactggttgcaaccgatgttgccgcgcgcggtatcgacattcctgacgtcagccacgtc
tttaacttcgatatgccgcgcagtggcgatacttatttgcaccgtatcggacgtaccgcg
cgcgccggtcgtaaaggcaccgcaatttcgctggtagaagcccatgaccatctgctgctg
ggcaaagttggtcgctatattgaagagccaattaaagctcgcgtaattgatgagttacgc
ccgaaaacgcgtgcaccaagcgagaagcagaccggcaagccatcgaagaaagtactggca
aaacgcgccgagaagaaaaaagctaaagagaaagagaagccgcgggtgaaaaaacgccat
cgcgataccaaaaatattggtaagcgccgtaaaccaagcggaacgggcgtgccaccgcaa
acgacagaagagtaa
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