Erwinia pyrifoliae Ep1/96: EpC_16120
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Entry
EpC_16120 CDS
T01000
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
epy
Erwinia pyrifoliae Ep1/96
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epy03016
]
EpC_16120 (rnd)
Enzymes [BR:
epy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EpC_16120 (rnd)
Transfer RNA biogenesis [BR:
epy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EpC_16120 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CAX55391
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All DBs
Position
1834064..1835173
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AA seq
369 aa
AA seq
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MITTNAALSDVCLRARRVPALALDTEFVRTRTYYPRLGLIQLYDGETISLIDPLPITDWT
PFRDLLLDQQVIKYLHAGSEDLEVFQHEFGVLPQPMIDTQILAAFSGRPLSCGFATIVES
FTGIALDKSESRTDWLARPLSEKQCRYAAADVFYLLPIASKLVDETEAAGQMAAALDECR
LLCQRRTSVLKPQEAYREITNAWQLRPQQLAALRLMAAWRLEIAREKDMAVNFVVREENL
WKVARFMPGTLGELDHLGLSGQEIRFHGNALLKMVAKAKALEEEQLPPPVANLIDYPRYK
QIFKSLKELVAETAERHGVSQELLASRRQINQLLNWHWQLKPQQGKPELVDGWRGVLLDA
GIAEILAAD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccacgaacgcagcgctttccgacgtttgcctgcgcgcgcgccgggttccggcg
ctggcgctggacactgaatttgttcgtacccgtacttactacccccgtctggggttgatc
cagctttacgatggagagactatctctctgattgatccacttcccattaccgactggact
cccttcagagatctgctgttggatcagcaggtcataaaatacctgcatgccgggagcgag
gatctggaagtttttcagcatgaatttggcgtgctgccgcagccaatgattgatacgcag
atcctcgcggcatttagtgggcgtcccttatcctgcggttttgccactatcgttgaatcc
tttaccggcatcgcgctggataaaagtgaatcgcgcaccgactggcttgcacgaccattg
agtgaaaagcagtgccggtatgcggctgccgatgtgttctatttactgcccattgccagt
aagctggtagacgaaaccgaagcggcaggtcagatggccgctgcgcttgatgagtgtcgt
ttgctctgtcagcgccgcaccagcgtactgaaaccacaagaagcctaccgggaaatcact
aacgcctggcagttacgcccacagcagctggcggcattgcgcctgatggccgcatggcga
ctggaaatagcgcgtgaaaaggatatggcggtaaactttgtcgttcgtgaagagaatctg
tggaaggttgcacgctttatgcccggcaccctgggagaactggatcacttagggttatca
gggcaggagattcgttttcacggcaatgcgctgttgaagatggttgccaaggcgaaggcg
ttggaggaggaacagttaccgccacctgtagccaaccttattgactatccacgttataag
cagatatttaagagccttaaagaactggtagccgaaacggcggagcgtcacggcgtcagt
caggagctgttagcatcaaggcgtcagataaatcagctattaaactggcactggcaactc
aaacctcagcaggggaaacctgaactggttgacggctggcgtggcgttctgttggacgca
ggtattgccgagatcctcgcggcagactga
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