Eremothecium cymbalariae: Ecym_4274
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Entry
Ecym_4274 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erc03016
]
Ecym_4274
Enzymes [BR:
erc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Ecym_4274
Transfer RNA biogenesis [BR:
erc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
Ecym_4274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
11469478
NCBI-ProteinID:
XP_003646155
UniProt:
G8JTI5
LinkDB
All DBs
Position
4:591238..592332
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AA seq
364 aa
AA seq
DB search
MAKYISNRRRYEHKLPLELIQLPPLIPHNPVSWLHWIFKYVTAVNYMRQTIPVEIDASGK
IIISDHDHMRYLWERGFFGTGQLSRSEPTWYERTASRLQLDGSKQDGVQLEQVTRLRRKQ
RLEFKKERAKFEEKKLHLRMNGVLESEILGEEQAFLKSLRDQELQYGSVNESGSGGGSSF
EGIRMEDSDILTEDGTGIIKLEKLELMPVEAMFLTFALPVLDISMKDLLHSIFVETPSFE
QIEALCMKYAAYHHYRSHGWCVRSGVKFGCDYMLYRQGPPFHHAEFSVMVLHHNQAQHDY
TWYSTVARVVGGAKKCLVLCYISKKAADDILMELWSRGSYAQAFALFEVNELVYRRWVPG
KNRD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatatatatcgaacagacgcagatatgagcacaagctaccgctagaactaatc
cagctacctcctttaatacctcataacccagtttcatggctacactggatatttaagtat
gtgaccgctgtaaattatatgcgtcaaactataccagtagaaattgatgctagtggtaaa
ataatcatatcggatcatgatcatatgagatatttatgggaaagagggttttttggtact
ggtcaactctctagaagtgagcccacatggtatgaacgtactgcaagtaggttacagttg
gatggttctaagcaagacggggtacagttggaacaggttacgcgcctaagacgaaaacag
cgattagaatttaagaaagaaagagctaaattcgaagagaagaagttgcatttgagaatg
aacggtgttttggaaagtgaaatcctgggtgaagaacaagcatttttgaaaagtttacga
gatcaagaattacaatacggttcagtaaatgaaagcggcagcggtggcggcagcagcttc
gagggcatccgcatggaagactctgatatattaaccgaggatggaactggtataattaag
ttggagaagcttgagttaatgcccgttgaagcaatgttcttaacgtttgctcttcccgtg
ttagacatcagcatgaaggatttattacattcaatctttgtggaaacaccgtcatttgaa
cagatcgaagctctgtgcatgaaatatgctgcgtaccaccattatagatctcatggttgg
tgtgtaaggtcaggagttaaatttggatgtgattacatgttatacagacaaggcccacct
ttccatcacgctgaattcagtgtcatggtgctgcatcataaccaagctcaacatgattat
acatggtactctactgtagcaagagttgttggtggcgccaaaaaatgtctagtcttgtgt
tatatctctaagaaggcggcagatgacatattgatggaactctggagtcgtgggagttat
gcacaggcatttgctctctttgaagttaacgaattggtttatagaagatgggttccaggt
aagaatagagattag
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