Erwinia sp. Ejp617: EJP617_14050
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Entry
EJP617_14050 CDS
T01935
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03420
Nucleotide excision repair
erj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJP617_14050 (uvrD)
03430 Mismatch repair
EJP617_14050 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erj03400
]
EJP617_14050 (uvrD)
Enzymes [BR:
erj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJP617_14050 (uvrD)
DNA repair and recombination proteins [BR:
erj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJP617_14050 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EJP617_14050 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
ADP11086
LinkDB
All DBs
Position
1559299..1561461
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMGVENCSPHSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPIEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRMLAGDT
GKVIIVGDDDQSIYGWRGAQVENIQRFLQDFPAAETIRLEQNYRSTNNILKAANTLIANN
NGRLGKELWTEDSDGEPIAIYCAFNELDEARFVVNRIKVWMENGGALNDCAILYRSNAQS
RVLEEALLQTSMPYRIYGGMRFFERQEIKDSLAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQSARERQLTLWQTARALLQEKALAGRAASALQRFTELVDSLAQETSDMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVNATRQYSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTMHAAKGLEFMQVFIVGMEEGMFPSQMSLEEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPVECVEEVRLRASISRPVSHQRMG
APVAKNDSGFTLGQRVHHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLEAM
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgatagcttgaatgacaaacaacgtgaggccgtggccgct
ccgcgcagtaatctgctggtactggccggagcgggcagtggcaaaacgcgcgtactggtg
catcgtatcgcctggctgatgggagtagaaaactgttcacctcactcgatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgccatcgtatcgaacagctgatcggcacc
agccagggcggaatgtggatcggcaccttccacggccttgcgcaccgtctactgcgtgcg
caccatctggatgccaacctgccgcaggacttccagatcctcgacagtgaagaccagctg
cgcctgctgaaacgcctgattaaggcaatgaatctggatgagaagcagtggccggcccgt
caggggatgtggtacatcaacggcaagaaagacgaagggctgcgcccgaagcatatcgaa
agctacggcaacccgattgagcaaacctggctgcgtatttaccaggcctatcaggaagcg
tgcgatcgcgccgggctggtggacttcgccgagctgctgctgcgtgcgcacgagctgtgg
ctgaataaaccgcatatccttaaccactatcgtgaaaggtttaccaacatcctggttgac
gaattccaggataccaacaatatccagtacgcttggatccgtatgctggccggtgacacg
gggaaagtgattatcgtcggtgacgacgatcagtcgatctacggctggcgtggggcgcag
gtggagaatattcagcgcttcctgcaggacttcccggcggcagaaaccattcgccttgag
cagaactatcgttcgaccaacaatatcctgaaagcggcgaataccctgattgccaacaac
aacggtcgcctgggtaaagagctgtggactgaagacagcgacggtgagccaatcgcgatt
tactgcgcctttaacgagctggatgaagcgcgttttgtggttaatcgcatcaaggtgtgg
atggaaaacggcggcgcgctaaacgactgcgctatcctgtaccgcagcaacgcccagtcg
cgcgtgctggaagaagcgctgttacaaaccagcatgccgtaccgtatttatggcggtatg
cgcttcttcgaacgccaggaaatcaaggattcccttgcctatctgcgtctaatctctaac
cgtaatgacgatgcggcctttgagcgcgtggtgaataccccgacgcgtggcatcggcgac
cgcacgcttgatgtggttcgccagtcggcgcgtgagcgccagctgaccttatggcaaacc
gcgcgtgcgctgttgcaggaaaaagcgctggccgggcgtgcggcttccgctctgcaacgc
ttcaccgaactggtggactcgctggcacaggaaaccagcgacatgccgctgcacgttcag
acggatcgggtgatcaaagactccggcctgtggctgatgtacgagcaggagaaaggcgag
aagggccaggcgcgaattgaaaaccttgaagaactggtcaatgccacccgccagtacagc
tatcaggatgaggatgaagacctgatgccgctgcaggcattcttgtctcatgccgcgctg
gaagcgggggaaggccaggccgataagtggcaggatgccgtgcagctgatgaccatgcac
gccgcgaaaggccttgaatttatgcaggtatttatcgtcggcatggaagaaggcatgttt
cccagccagatgtcgcttgaagagggcggacggctggaagaagagcgccgtcttgcctat
gttggcgtgacgcgggcgatgcaaaaactgacgctgacctacgccgaaacacggcggctg
tacggcaaggaggtctatcaccggccgtcgcgctttattggcgaactgccggtggagtgc
gtggaagaggtgcggctgcgcgccagcatcagtcggccggtcagtcatcagcgcatgggc
gcgccggtggcgaaaaatgacagcggttttaccctcggccagcgggtacatcatgcgaaa
tttggcgaagggaccattgttaaccttgaaggtagcggtgaacacagccgtttgcaggtg
gcgtttcagggccagggcattaagtggctggtcgccgcgtatgccaaactggaagcgatg
tga
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