Erwinia sp. Ejp617: EJP617_18720
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Entry
EJP617_18720 CDS
T01935
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJP617_18720 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erj03400
]
EJP617_18720 (recD)
Enzymes [BR:
erj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EJP617_18720 (recD)
DNA repair and recombination proteins [BR:
erj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJP617_18720 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_16
UvrD_C
T2SSE
TetR_C_31
AAA_28
FtsK_SpoIIIE
Phageshock_PspD
PhoH
TrwB_AAD_bind
DEAD
SRP54
DUF87
MukB
AAA
CbiA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADP11553
LinkDB
All DBs
Position
2070598..2072445
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AA seq
615 aa
AA seq
DB search
MTLAEALQLAQHQRLLRPLDVQFACMVATEQQPALMLAAALVSRDAGEGHVCLPLAQLRP
ASFFAGRHPELAQALWQAAGAPEDWQALLLAQSAVSDGQQATPLVVYQQRLYLHRMWQSE
GEIAQFIQRQNYPQDLEEKRVRDTLERYFGQQPDDWQKIAAAVALTRQVAVISGGPGTGK
TTTVAKLLASLIELSPTPPRIELAAPTGKAAARLTESLGKTLRQLQLADRILRSFPLEAT
TLHRLLGALPGSQRMRYHAGNPLHLDVLVVDEASMVDLPMLANLITALPAHARVIFLGDR
DQLASVEAGAVLGDICRCAEEGYSPQRAAELTRLTGCEVAGREDDSASAVRDTICLLRKS
YRFTQSSGIGQLALAVNAGEVKRAEQLFSKGLSDIRHHTLSSSEDYQQLLDDCVAGYREY
LKLLKEGATPGEVLAAFGRFQLLCALREGPFGVAGLNDRIEQTLRLAGLIRRNTALNGKW
YAGRPVMIARNDRALGLFNGDIGIAMPDEKQQLKVYFPLPDGTLKAVQPSRLPPHDTAYA
MTVHKSQGSEFEHTLLVLPNQMMPVLTRELVYTAMTRARQQLTLYADFSVFNSAVKIRTQ
RRSGLVDRLNNRAAF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacgctggcagaagccttacagctggcacagcaccagcgcttactacgtcctctggac
gtgcagtttgcctgcatggtggcgactgaacagcagcccgcgctgatgctggcggcagcg
ctggtcagccgcgacgccggggaaggtcatgtttgtctgccgttggcacagctgcggcct
gcctctttttttgccgggcgccatccggagctggcacaggcactgtggcaggctgcgggc
gcgccggaggactggcaggcgctgctgctggcacaaagcgcggtcagcgacggccagcag
gccacgccgctggtggtgtatcaacagcggctttatctgcatcgtatgtggcaaagcgag
ggggaaattgcgcagtttattcagcgtcagaattatcctcaggatctggaagaaaaacgg
gtgcgtgatacgctggagcgttattttggccagcagcccgatgactggcaaaagatcgcc
gcagcggtagcgctgacgcgccaggtggcggtgatctccggcgggcctggaaccggcaaa
accaccaccgtggccaagctgcttgccagcctgattgaactatcgcccacgccaccgcgt
atcgaactggcggcaccgaccggcaaggcggcggcgcggctgacggaatcgctcggtaaa
acgctgcgacagctgcagctggccgatcgcatcctgagaagtttcccattggaggcgacg
acgctgcatcgcctgctgggggcgctgccgggcagtcagcgcatgcgctatcatgccgga
aatccactgcatcttgacgtactggtcgtcgatgaagcctcaatggtggatctcccgatg
ctggctaacctgattaccgctttgcccgctcatgcgcgggttatctttctcggtgaccgc
gatcagctggcttcagtcgaagccggagcggtgctgggtgatatttgccgctgtgcggaa
gagggctacagcccgcagcgtgccgcagagctgacgcgtcttaccggctgcgaggtggcg
gggcgcgaagatgatagcgcctccgcggtgcgcgatacgatctgcctgctgcgtaaaagc
tatcgttttacgcaatcatccggcatcggccagctggcgctggcggttaatgcgggtgag
gtaaaaagggcagagcagttattcagcaagggtttaagcgatatccgccaccatacgcta
agcagcagcgaggactatcagcagctgctggacgactgtgttgcagggtaccgtgaatac
ctgaaattgctgaaggaaggagccacgccaggcgaagtcctggccgcatttggccgtttc
cagctgctgtgcgctctgcgcgaagggccgtttggtgttgcagggctgaatgaccgtatt
gaacagacgctgcgcctggcggggcttatccgccgcaataccgcactcaacggcaaatgg
tacgctggtcgcccggtgatgattgcgcgcaatgaccgtgcgctaggcctgtttaacggt
gatatcggcatcgcgatgccggatgaaaaacagcagctgaaagtgtattttccgttaccg
gatggcactctcaaagcggtgcagcccagccgcctgccgccgcatgatacggcctatgcc
atgacggtgcacaagtcgcagggatccgagtttgagcacacgctgctggttttacctaac
cagatgatgccggtactgacccgtgagctggtttataccgccatgacccgcgccagacag
cagttaaccctttatgccgacttttcggtgttcaacagtgcggtgaagatacgcacgcag
cggcgtagtgggctggtggatcggctgaataacagggcagctttttag
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