Sinorhizobium sojae: SJ05684_c35780
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Entry
SJ05684_c35780 CDS
T05052
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
esj
Sinorhizobium sojae
Pathway
esj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SJ05684_c35780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esj03019
]
SJ05684_c35780
03016 Transfer RNA biogenesis [BR:
esj03016
]
SJ05684_c35780
Enzymes [BR:
esj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SJ05684_c35780
Messenger RNA biogenesis [BR:
esj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SJ05684_c35780
Transfer RNA biogenesis [BR:
esj03016
]
Prokaryotic type
tRNA degradation factors
SJ05684_c35780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ASY64993
UniProt:
A0A249PGA6
LinkDB
All DBs
Position
3554279..3556432
Genome browser
AA seq
717 aa
AA seq
DB search
MFETHKVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPTENETLVSRLIDRPIRPLFPEGYKNDTQVIITVMQH
DLENNPDVVAMVAASAALTLSGVPFMGPVGGARVGYINGDYVLNPHLDEMDESTLDLIVA
GTQDAVLMVESEAKELPEDIMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPREFEPEDHSA
LENAMLEIAEDELRNAYKITEKAARYAAVDAVKAKVKEHFLPEGVEIPGHTAEEIAAVFK
HLQAKIVRWNILDTQSRIDGRDLVTVRPIVAEVGLLPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKENFMLHYNFPPFSVGETGRLGSPGRREIGHGKLAWRAIHPMLPTA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDERFAVL
SDILGDEDHLGDMDFKVAGTEFGVTSLQMDIKIAGITEEIMKVALDQAKAGRVHILGEMA
NAISESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIDDDGTVKIA
SASSKEIEAARKWIHSIVAEPEVGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASER
VAKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEIVAEKAEKKDGGEAAE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagacccacaaggtagaaatcgaatgggctgggcgtccgctcaagctcgaaacc
ggcaagatcgcacgccaggctgacggtgcagttcttgccacctacggcgaaaccgtcgtg
ctcgccaccgtggtttcggccaaggcgccgaagcccggccaggatttctttcccctgacc
gtcaactaccaggaaaagacctatgccgccggcaagatccccggcggttacttcaagcgc
gaaggccgtccgaccgagaacgagacgctcgtctcacgcctgatcgaccgtccgatccgc
ccgcttttccccgaaggctacaagaacgacacgcaggtcatcatcacggtcatgcagcat
gacctggagaacaacccggacgtcgtcgcgatggtcgccgcctccgctgcgctgacgctt
tccggcgttcccttcatggggccggtcggcggcgcacgcgtcggttacatcaatggcgat
tacgtcctgaatccgcatctcgacgagatggacgaatccaccctcgacctcatcgtcgcc
ggcacccaggatgccgtgctgatggtcgagtcggaagcgaaggaactgcccgaggacatc
atgctcggcgccgtcatgttcggccataagggtttccagccggtgatcgacgcgatcatc
aagctcgccgaagtcgccgccaaggaaccgcgcgaattcgagccggaagaccattccgcc
ctggaaaatgccatgctcgaaattgccgaggacgagctgcgcaacgcctacaaaatcacc
gagaaggctgcacgctatgcggccgtcgatgccgtcaaggcaaaggtcaaggaacacttc
ctgccggaaggcgtcgagattcccggccataccgcggaagagatcgccgcggtgttcaag
cacctgcaggccaagatcgtccgctggaacatcctcgacacgcagagccgcatcgacggc
cgcgatctcgtcactgtccgtccgatcgtcgccgaagtcggccttctgccgcgcacccac
ggctccgccctcttcacccgcggcgaaacgcaggcgatcgtcgtcgccacgctcggtacc
ggcgaagacgagcagtatgtcgattccttgacgggcatgtacaaggaaaacttcatgctg
cattacaacttcccgcccttctcggtcggcgaaacgggccgcctcggttcgccgggccgc
cgtgagatcggccacggcaagctcgcttggcgcgccatccacccgatgctgccgacggcg
gagcagttcccctacacgctgcgtgtcgtgtccgagatcaccgagtcgaacggctcgtcc
tcgatggcgaccgtctgcggcacctcgctggcgctgatggatgccggcgtgccgctcgca
aagcccgttgccggcatcgccatgggcctgatcaaggaagacgagcgcttcgccgtcctc
tcggacattctgggcgacgaggatcatctcggcgacatggacttcaaggtcgcgggcacc
gaattcggcgtcacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatc
atgaaggtcgcgcttgatcaggccaaggccgggcgcgttcacattctcggcgaaatggcc
aatgcgatctccgaaagccgcggccagctcggcgaattcgcgccgcgcatcgaggtcatg
aatatcccggtcgacaagatccgcgaagtcatcggctccggcggcaaggtcatccgcgag
atcgtcgagaagaccggcgccaagatcaatatcgacgacgacggcacggtcaagatcgcc
tccgcctcctcgaaggagatcgaggccgcccgcaagtggatccactcgatcgtcgccgag
ccggaagtcggccaaatctacgagggcacggttgtcaagaccgccgacttcggcgccttc
gtcaatttcttcggcgcccgcgacggcctcgtccacatctcgcagctcgcctccgagcgt
gtcgccaagacgaccgacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggc
ttcgacgagcgcggcaaagtccgtctctcgatgaaggtcgtcgaccaggcgaccggcaag
gagatcgtcgccgaaaaggccgagaagaaggacggcggcgaagcggccgaataa
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