Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_25959
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Entry
O3M_25959 CDS
T02316
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
esm
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Pathway
esm03030
DNA replication
esm03430
Mismatch repair
esm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O3M_25959
03430 Mismatch repair
O3M_25959
03440 Homologous recombination
O3M_25959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esm03032
]
O3M_25959
03400 DNA repair and recombination proteins [BR:
esm03400
]
O3M_25959
Enzymes [BR:
esm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O3M_25959
DNA replication proteins [BR:
esm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O3M_25959
DNA repair and recombination proteins [BR:
esm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O3M_25959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
UDG
Motif
Other DBs
NCBI-ProteinID:
AFS59789
LinkDB
All DBs
Position
p09EL50:complement(71236..74754)
Genome browser
AA seq
1172 aa
AA seq
DB search
MKALMVRTDFSLGESALKAENAVKIAREAGYTAVISADSMNIASVIPLQRAAGDDMAVIC
GVKLNIVDDPTYEYRAKIAKESKGCMESLERGRNYSFTALIKNEQGYRDICELMTVANTR
EQFYFVPRLSLEQLVSTYAKGNIILLTSDIGSVFQRNDFAKIISTLITAGGKDNFYSVVY
PHPTPFYDQINVRAMKVASALKIEPVAFYPAYYESIDDADIKDIAHMVTNNIKIDQPHRL
RIPHQRDNAVNGRRHLLEALKTFSVRMDVPVTAAMASTTQDTIIDACTWRWHELPPALPK
MADDEPATLMKLAVAGLRKRLTTKEFGYTPPASENRVYVERLKYEMDTLTRLGFCGYFLM
VRDLMNHSRETGIPVGPGRGSSAGSLVAWCIGITNVDPIRHGLLFERFINPERLDLPDAD
LDFSQARRHEVIEYLNERYGEDYVAGIPNFTYLGAASALRDTARIYGVESADMAVSKELK
NVEDDSLPLEELREQLASLDKYATKYPDAFNAACKLQSLMRGFGRHAAGMIVAGVPLTER
TPVERRGDARCIAFDKRYCEAMGLIKLDVLGLATLDLLDSAKRYIKENTGEDINLDAISL
EDRKVLDGFAAGYTQGVFQLESGPMRKLLKDLGGGIEPMSFKTVVATTALFRPGPIQSGM
LDDYVSVAKGFMTPESLHPVLDELTAETNGVILYQEQTMNATRLLAGFTMAEADGVRKAI
GKKDMEKMKSMGEKFIVQAQAGWIDVELEDGTTQRIHRAEHFKCEDGTLKTVEEALEYGA
KLPINAVRVTASHPGLSEMKAKEIWTAFEKNGAYQFNKSHSVAYSLISYQSMWLKTHYPA
EFFAAALTILGEDKHQGLVKDALTYGIRVLPPDVNVSSNRIEIRTLEDGSQVLYAPFSAV
KGCSENGCQAIMRAREKVGGKFESLAQFEEAVEKRACNSRVRESLQKVGAFASIEPGSLP
ATDPERLRDQAELMGNLVIDAVKASRPFEMNPKRSAEINVLMTRMAAEMGLGDELIRPSI
GIKPKIMIILDNANGNDARTGYFMENGYDDFKAKLLTAGDLRMGDLYVTGVCKKVKDKEK
DYTKDEIGQFTDFIREEINLVRPTYVLTCGSRATALFNNKNKPSDLVGRKEYLPDLDVTV
FYGFNPNILYFRPEEGERLEAILADVAETIKT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctctgatggttcgaactgacttctctcttggggagtcggctctaaaagcagaa
aacgcggtgaagattgccagagaagctggctacaccgctgtaatttcggcagatagcatg
aatattgcgagtgttattccactacaacgtgccgctggtgacgacatggcggttatttgt
ggtgtgaaactaaacattgttgatgatcccacatacgagtaccgggctaaaattgctaaa
gagtctaagggatgtatggaatcattagagcgaggacgtaactactcgtttaccgctcta
attaaaaatgagcaaggatatcgcgacatctgcgaactaatgacggtggccaacacacga
gaacagttctactttgtaccgcgtctctcgctcgaacagttggtttctacatatgccaaa
ggcaacatcatcctgctcacttccgacatcggtagcgtgttccaacgcaacgattttgca
aaaatcataagcacactgattacagcgggtggaaaagacaacttctatagtgtggtttat
ccgcaccctaccccattctacgaccagattaacgtccgggcgatgaaagtcgccagcgca
ttgaaaatagagccagtggcgttctatcccgcttattacgaatcgatcgacgatgcagac
attaaagacattgcgcacatggttacgaacaacatcaaaatcgaccagccgcatcgtctg
cgtatcccccaccagcgagataacgccgtcaatggtcgccgccatctccttgaggcgctg
aaaaccttctccgttcgcatggatgtgccggtaacagctgcaatggcctcaacaacgcag
gataccattatcgatgcctgcacatggcgctggcatgaattgccaccagcactgccaaag
atggcagacgacgagcctgcaacgcttatgaaactggctgttgcagggctgcgtaaacgt
cttaccacaaaagagtttggctacacaccacctgcttctgagaacagggtttatgttgag
cggctaaagtacgaaatggacacgctgactcgcctgggattttgtggttacttcctgatg
gtacgcgatctgatgaatcacagccgtgaaactggcattcctgtcgggcctggtcgtggt
tcctctgccggttctctggtggcgtggtgcataggcataaccaacgtcgacccaatccgt
cacggtcttctgtttgagcgtttcatcaaccctgagcgtctcgacttgccggatgcggac
ttggacttcagccaggcacgtcgccatgaggtgatcgagtatctgaatgaacgctacggc
gaagattacgttgcaggcattccgaacttcacctacctgggcgcagcctcagcactacgt
gataccgctcgtatttatggtgtggagtccgcagatatggcggtatcaaaagagctgaag
aacgtcgaggatgatagccttccattggaggagctgcgcgaacaactggcaagtctcgac
aaatacgcgacaaaataccctgatgcattcaatgctgcctgcaagttacaaagtcttatg
cgtggctttggtagacatgcggcagggatgatcgtagcaggtgttcctctgacagaacgt
acaccggttgaacgccgtggtgacgcgcgttgtatcgcatttgacaagcgttactgcgag
gctatgggcctaattaagctggacgtacttggtctggcaactctcgatttgctcgatagt
gcaaaacgctacataaaagagaacacaggtgaagatatcaatcttgatgccatttctctt
gaagatcgcaaggtgctggatggttttgctgctgggtacactcaaggtgttttccagctt
gaatcaggcccaatgcgcaagctgcttaaagatttaggtggtggaattgagccaatgagc
tttaaaacggttgttgctacgactgcgctcttccggccggggccaattcagtcaggcatg
ttggatgactatgtttctgtagccaaaggctttatgacgccggaatcattacaccccgtt
cttgatgaacttaccgcagaaacaaatggcgtgattctctatcaggaacagacgatgaac
gcgactcgattgcttgctggcttcacaatggctgaagctgacggcgttcgtaaagcgatc
ggcaaaaaagacatggaaaaaatgaagagcatgggcgagaagttcatcgttcaggctcaa
gctggctggatagacgttgagctggaagatggcactacacagcgcattcaccgtgcggaa
cattttaaatgcgaagacggaactctgaaaactgtcgaagaggcacttgagtacggcgca
aaactacctataaacgcagtacgcgttacagcgtcacatccagggctatcagagatgaaa
gcgaaggagatctggaccgcattcgaaaagaatggtgcctaccagttcaacaaatcacac
tctgttgcttactccttaatcagttatcaatctatgtggttgaaaactcattatcccgcg
gagttcttcgctgctgctctcactattcttggcgaagataaacaccaggggctggttaaa
gatgcgctgacctatggtattcgcgtattgccaccagacgttaacgtgtcatctaaccga
atcgagatccgcacgcttgaagatggcagccaggtgctgtatgcgcccttctctgctgtg
aaagggtgttctgagaatggctgccaagccatcatgagagcgcgagaaaaagttggcggc
aaattcgagtcactggcgcaattcgaagaagctgtcgagaaacgtgcctgtaatagtcga
gtgcgcgaatcactgcaaaaagtaggtgcgtttgcatccatcgagccaggtagtctgcca
gcaactgatccagagcgtctccgcgaccaggctgaattgatgggaaaccttgtcatagac
gcagttaaagcctcacgtccgtttgagatgaaccccaaacgttcggctgagattaacgtg
ctcatgacacggatggcggctgaaatgggattaggtgatgaactaatccgccctagcatt
ggcattaagccgaaaatcatgatcattctggacaatgcgaacggcaatgatgctcgaacc
ggttactttatggagaacggatacgacgactttaaggccaagctattgacggctggagat
ttacgcatgggcgatctctatgtcacaggcgtttgcaagaaggttaaagacaaagaaaaa
gactacaccaaagacgagatcggccagttcaccgactttatacgtgaagagatcaatctg
gtgcgtccgacctatgtgctgacgtgtggcagccgggcaacggcattgtttaacaacaaa
aacaagccatccgatttggtcggcaggaaggagtaccttccagaccttgacgttactgtc
ttttacgggtttaaccccaacattctttacttcagacctgaagagggagaacgactagaa
gcgatattagccgacgtagcagaaaccattaagacgtga
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