Erwinia tasmaniensis: ETA_03530
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Entry
ETA_03530 CDS
T00711
Symbol
deaD
Name
(GenBank) Cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
eta
Erwinia tasmaniensis
Pathway
eta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETA_03530 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eta03019
]
ETA_03530 (deaD)
03009 Ribosome biogenesis [BR:
eta03009
]
ETA_03530 (deaD)
Enzymes [BR:
eta01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
ETA_03530 (deaD)
Messenger RNA biogenesis [BR:
eta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ETA_03530 (deaD)
Ribosome biogenesis [BR:
eta03009
]
Prokaryotic type
rRNA helicases
ETA_03530 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAO95399
UniProt:
B2VGN9
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All DBs
Position
412383..414293
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AA seq
636 aa
AA seq
DB search
MYYMTDIQTTFADLGLNADLLESLNGMGYVKPSPIQAECIPHLLAGRDVLGMAQTGSGKT
AAFSLPLLHNIDPTVKAPQILVLAPTRELAVQVAEAVTDFSKHMRGLNVVALYGGQRYDV
QLRALRQGPQVVVGTPGRLLDHLKRGTLDLSNLRGLVLDEADEMLRMGFIEDVETIMAQI
PDGHQTALFSATMPEAIRRITKRFMKDPQEVRIQSSLTTRPDISQSYWTAYGRKTDALTR
FLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDI
LIATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLR
NIERTMKLTIPEVELPNAELLGERRLAKFAAKVQQQLESSDLEQYRALLSKMQPEDELDI
ETLAAALLKMAQGERPLIVPADAPQRPRREFRERDERRGDRPDRGPREARGEAPRDGDRP
RRERRDVGDMEVYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKG
MPGDVLQHFTRTRILNKPMNMQLIGDAQPRSNERGGERRPGGPARGGFGAGREGGRGAEG
GGRRFSNDRGGERRPAGNRGPRREEGGSAPARRRDA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgtactacatgactgatatccaaactactttcgctgaccttggcctgaacgccgacctc
cttgaatcactgaacggcatgggctacgtaaagccatccccaatccaggctgagtgtatt
cctcacctgctggcaggtcgtgacgtgttaggtatggcgcagaccgggagtggcaaaact
gcagcattctcgctgccactgttacataacatcgatccaacggttaaagcaccacagatc
ctggtgctggcacctacccgcgaactggcggtacaggtagctgaagccgtcactgatttc
tctaaacatatgcgcggtctgaacgttgttgccctttacggcggccagcgttacgacgtg
cagctgcgcgctctgcgccagggcccacaggttgttgtcggcacgcctggccgtctgctt
gaccatctgaaacgcggcacgttggatctgtccaacctgcgcggtctggtgctggacgaa
gccgatgaaatgctgcgtatgggctttatcgaagacgttgaaacgatcatggcgcagatc
ccagacggtcatcagaccgcgctgttctctgccactatgccagaggcgattcgccgtatt
accaaacgctttatgaaagatccgcaggaagtgcgcatccagtcaagcctgactacacgt
cctgacatcagccagagctactggactgcctacggccgtaagaccgatgcactgacccgc
ttcctggaagcagaagactttgatgcagcgattattttcgtgcgtaccaaaaacgcgacg
ctggaagttgccgaagcgcttgagcgcaacggttataacagcgccgcgctgaatggtgac
atgaatcaggcactgcgtgagcagacgctggagcgccttaaagatggccgtctggatatc
ctgattgccaccgacgttgctgcccgtggtctggacgttgagcgtatcagcctggtcgtt
aactacgacattccaatggacgcagaatcttacgtgcaccgcatcggccgtaccggtcgt
gctggtcgtgccggtcgtgccctactgttcgttgagaaccgtgaacgtcgcctgctgcgt
aacatcgaacgcaccatgaagctgaccattccagaagttgaactgccaaatgcagaactg
ctgggtgagcgtcgtctggctaagttcgccgctaaagttcagcagcagctggaaagcagc
gatctggaacagtaccgtgcgctgttgtctaaaatgcagccggaagacgagctggacatc
gaaaccctggccgcagctctgctgaaaatggctcagggcgaacgcccgctgatcgttcct
gccgatgcgccacagcgtccgcgccgcgagttccgtgagcgtgacgagcgtcgcggtgac
cgtcctgaccgtggtccacgcgaagcgcgtggcgaagcaccgcgcgatggcgaccgtcca
cgtcgtgaacgtcgtgacgttggcgatatggaagtgtaccgcattgaagtgggccgtgat
gatggcgttgaagttcgtcacatcgttggtgctatcgctaacgaaggtgatatcagcagc
cgttacatcggtaacatcaagctgtttggtacgcactccaccatcgagctgccaaaaggt
atgccgggcgatgtgctccagcactttacccgcacgcgtattctcaacaaaccgatgaat
atgcagctgattggtgatgcacagccgcgtagcaacgaacgtggtggtgagcgtcgtcct
ggcggtcctgcgcgcggtggtttcggcgccggtcgtgaaggcggtcgcggtgctgaaggc
ggcggtcgtcgtttcagcaacgatcgcggtggtgaacgtcgtccagcgggcaaccgtggt
cctcgtcgcgaagaaggcggcagtgcaccagcacgtcgtcgtgatgcgtaa
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