KEGG   Erwinia tasmaniensis: ETA_03530
Entry
ETA_03530         CDS       T00711                                 
Symbol
deaD
Name
(GenBank) Cold-shock DEAD-box protein A
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
eta  Erwinia tasmaniensis
Pathway
eta03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ETA_03530 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eta03019]
    ETA_03530 (deaD)
   03009 Ribosome biogenesis [BR:eta03009]
    ETA_03530 (deaD)
Enzymes [BR:eta01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     ETA_03530 (deaD)
Messenger RNA biogenesis [BR:eta03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ETA_03530 (deaD)
Ribosome biogenesis [BR:eta03009]
 Prokaryotic type
  rRNA helicases
   ETA_03530 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 DRTGG AAA_22
Other DBs
NCBI-ProteinID: CAO95399
UniProt: B2VGN9
LinkDB
Position
412383..414293
AA seq 636 aa
MYYMTDIQTTFADLGLNADLLESLNGMGYVKPSPIQAECIPHLLAGRDVLGMAQTGSGKT
AAFSLPLLHNIDPTVKAPQILVLAPTRELAVQVAEAVTDFSKHMRGLNVVALYGGQRYDV
QLRALRQGPQVVVGTPGRLLDHLKRGTLDLSNLRGLVLDEADEMLRMGFIEDVETIMAQI
PDGHQTALFSATMPEAIRRITKRFMKDPQEVRIQSSLTTRPDISQSYWTAYGRKTDALTR
FLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDI
LIATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLR
NIERTMKLTIPEVELPNAELLGERRLAKFAAKVQQQLESSDLEQYRALLSKMQPEDELDI
ETLAAALLKMAQGERPLIVPADAPQRPRREFRERDERRGDRPDRGPREARGEAPRDGDRP
RRERRDVGDMEVYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKG
MPGDVLQHFTRTRILNKPMNMQLIGDAQPRSNERGGERRPGGPARGGFGAGREGGRGAEG
GGRRFSNDRGGERRPAGNRGPRREEGGSAPARRRDA
NT seq 1911 nt   +upstreamnt  +downstreamnt
gtgtactacatgactgatatccaaactactttcgctgaccttggcctgaacgccgacctc
cttgaatcactgaacggcatgggctacgtaaagccatccccaatccaggctgagtgtatt
cctcacctgctggcaggtcgtgacgtgttaggtatggcgcagaccgggagtggcaaaact
gcagcattctcgctgccactgttacataacatcgatccaacggttaaagcaccacagatc
ctggtgctggcacctacccgcgaactggcggtacaggtagctgaagccgtcactgatttc
tctaaacatatgcgcggtctgaacgttgttgccctttacggcggccagcgttacgacgtg
cagctgcgcgctctgcgccagggcccacaggttgttgtcggcacgcctggccgtctgctt
gaccatctgaaacgcggcacgttggatctgtccaacctgcgcggtctggtgctggacgaa
gccgatgaaatgctgcgtatgggctttatcgaagacgttgaaacgatcatggcgcagatc
ccagacggtcatcagaccgcgctgttctctgccactatgccagaggcgattcgccgtatt
accaaacgctttatgaaagatccgcaggaagtgcgcatccagtcaagcctgactacacgt
cctgacatcagccagagctactggactgcctacggccgtaagaccgatgcactgacccgc
ttcctggaagcagaagactttgatgcagcgattattttcgtgcgtaccaaaaacgcgacg
ctggaagttgccgaagcgcttgagcgcaacggttataacagcgccgcgctgaatggtgac
atgaatcaggcactgcgtgagcagacgctggagcgccttaaagatggccgtctggatatc
ctgattgccaccgacgttgctgcccgtggtctggacgttgagcgtatcagcctggtcgtt
aactacgacattccaatggacgcagaatcttacgtgcaccgcatcggccgtaccggtcgt
gctggtcgtgccggtcgtgccctactgttcgttgagaaccgtgaacgtcgcctgctgcgt
aacatcgaacgcaccatgaagctgaccattccagaagttgaactgccaaatgcagaactg
ctgggtgagcgtcgtctggctaagttcgccgctaaagttcagcagcagctggaaagcagc
gatctggaacagtaccgtgcgctgttgtctaaaatgcagccggaagacgagctggacatc
gaaaccctggccgcagctctgctgaaaatggctcagggcgaacgcccgctgatcgttcct
gccgatgcgccacagcgtccgcgccgcgagttccgtgagcgtgacgagcgtcgcggtgac
cgtcctgaccgtggtccacgcgaagcgcgtggcgaagcaccgcgcgatggcgaccgtcca
cgtcgtgaacgtcgtgacgttggcgatatggaagtgtaccgcattgaagtgggccgtgat
gatggcgttgaagttcgtcacatcgttggtgctatcgctaacgaaggtgatatcagcagc
cgttacatcggtaacatcaagctgtttggtacgcactccaccatcgagctgccaaaaggt
atgccgggcgatgtgctccagcactttacccgcacgcgtattctcaacaaaccgatgaat
atgcagctgattggtgatgcacagccgcgtagcaacgaacgtggtggtgagcgtcgtcct
ggcggtcctgcgcgcggtggtttcggcgccggtcgtgaaggcggtcgcggtgctgaaggc
ggcggtcgtcgtttcagcaacgatcgcggtggtgaacgtcgtccagcgggcaaccgtggt
cctcgtcgcgaagaaggcggcagtgcaccagcacgtcgtcgtgatgcgtaa

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