Candidatus Endomicrobium trichonymphae Rs-D17: RSTT_485
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Entry
RSTT_485 CDS
T05087
Symbol
trmA
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
eti
Candidatus Endomicrobium trichonymphae Rs-D17
Brite
KEGG Orthology (KO) [BR:
eti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eti03009
]
RSTT_485 (trmA)
Enzymes [BR:
eti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RSTT_485 (trmA)
Ribosome biogenesis [BR:
eti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RSTT_485 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_11
MethyltransfD12
PrmA
Methyltransf_32
UPF0020
Ubie_methyltran
TRM
PCMT
Methyltransf_12
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
BAV59065
LinkDB
All DBs
Position
complement(746614..747963)
Genome browser
AA seq
449 aa
AA seq
DB search
MSLKNKIINVSAEKIVFPGRSLCRCSDGIVLFSEGLLPGEAADVLVIKEKKTFREALLKN
ITSKSAERIEPLCPSFGFCGGCSFQNISYESQIKYKQEYISELLNFAGVKISKILISPQI
WHYRNKMEFSFFNNKGIADLGLHCKGMFNRYVSVPPCFIADKGFLQVVETVKRFANGNNF
SVYNNKTHEGFFRHLVLRKAGNNNQFLINVITNVVDCESVFLEPLIKELSEFSCSIYWTS
NGRKSDAVLADRLTLMCGKPFITERLNIGGKDYFFDISPFSFFQTNSKVTEILYTEILRL
LNPSKYTVLLDLYCGTGAIGISMAHNVKRVIGVECIGQAIDNAKENALANNVFNAEFYAS
DAEDWIKENKSCFDAVVVDPPRSGLTKDIIKFLLESKAKRIIYVSCNPSTLARDLQLITE
NSKCKIKEIIPIDMFPQTYHIETVVLLEF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaaaaataaaattattaatgttagtgctgaaaaaattgtttttccgggtcgt
tctctctgcagatgttctgatggaattgttctgtttagtgaaggtttgcttcccggcgaa
gccgcggatgtccttgtgataaaggaaaaaaaaacattcagagaagctctgcttaaaaat
attacttctaaatctgctgaaaggatagaacccttgtgtccgtctttcggcttttgcggc
ggatgttcttttcaaaacatttcttatgaaagtcagattaagtataaacaggaatatata
tcggaacttttaaattttgccggagtgaaaatttcaaaaatattgataagtccgcagatt
tggcattacagaaataaaatggaattcagtttttttaataataaaggtattgcagatttg
gggcttcactgtaaaggaatgtttaatagatatgtttcggtcccgccctgttttatagcg
gataaaggtttcttgcaagttgtcgaaactgtaaaaagatttgcaaacgggaacaacttt
tcggtgtacaacaataagactcatgaaggatttttcaggcatttggttttacgtaaagct
ggaaacaataatcagtttcttatcaacgtaattacaaatgtcgttgactgtgaatctgtg
tttttagaacctcttataaaagaactctccgaattttcttgcagtatttattggacgtcc
aacggaagaaaatctgatgcggttttagctgacaggttgactcttatgtgcggaaagccg
tttattactgaaaggcttaatataggtgggaaagactatttttttgatatttcgccgttt
tcattttttcagacaaattcaaaggtaactgaaattctctacactgagattttaagattg
ttaaatccgtcaaaatacactgttttacttgatttgtactgcggtacgggggcaattggt
atttcaatggctcataatgtcaaaagagttataggcgtagagtgtatcgggcaggcaatt
gacaatgcaaaagaaaatgctttggcgaataatgtttttaatgcggaattttatgcttca
gatgcagaagactggattaaagaaaacaagagttgttttgatgctgtggttgtcgatcct
ccgcgcagtggtcttactaaagatattataaagtttctgcttgagtcaaaagcaaaaaga
ataatttatgtttcttgtaatccgtccacgctagcaagagatctgcagttaattactgaa
aacagtaaatgtaaaatcaaagaaattatacctattgatatgtttccgcagacgtatcac
attgagacagtggtgctgttagagttctag
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