Edwardsiella tarda EIB202: ETAE_3138
Help
Entry
ETAE_3138 CDS
T01121
Name
(GenBank) diguanylate cyclase/phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
etr
Edwardsiella tarda EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etr03019
]
ETAE_3138
Messenger RNA biogenesis [BR:
etr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ETAE_3138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GGDEF_2
DUF948
Motif
Other DBs
NCBI-ProteinID:
ACY85969
LinkDB
All DBs
Position
complement(3310474..3312366)
Genome browser
AA seq
630 aa
AA seq
DB search
MRITTKFFAFITLLVALGMFLMLLGSTYSFYSQTHQRAETQLNILTAMIDQQLLTESRDS
VKRWLPVMMRSAGAVELSVYHDDRQVYYHHLPALYNPWRTNDNLRSFESPLLQHPGYRLK
MVYIEPTASYSHSLERMFPLSLSIGVMVIMLFFAYRWLRGQTQGIERLERRARRILSGDR
DLRAGGIGEFPASASSALDCLLAELSDAREERSRIDSLIRAFAAQDSRTGLNNRLFFDNQ
LTTLLEDEGAYGVVMILRLPDLEALASQPGRRQREEFRYALTNMLSTYVMRYPSGLLAHY
FQNNFAVLLPHRSLKEAEGFAAQLLASLAAIPSAPGVIADEVLHIGITLYRAGEQVESVM
DRAEQAARSATLQGGNGWFVDPIPQPEMVRGSVRWRTLLEQTLARGGARLFHKPAVTVDG
RVHHHYILPYIYDGNQPIPSAEFMPLVQQLGLAERFDRQMVSQIIPLLRRLPGQRLAFPL
TVDSLLQRSFQRWLRDTLLQSERPLRRRILIELSEADVCAHQARLGPILRLLRGLECQVV
VSQAGLRIVSTTYIKQLQVALVKLHPALVRNIDRRIENQLFVQSITGACEGTVAQVFATG
VRSKEEWRVLKEKGIAGGQGDFFAKSRPVL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattacaaccaaattctttgccttcattaccttactggttgcgttagggatgttt
ctgatgctgctgggcagcacctatagcttttacagccagacccatcagcgcgcggagacc
cagcttaatatcctgacggcgatgatcgaccagcagctgttgaccgagtcccgcgacagc
gtaaagcgctggcttccggtgatgatgcgatcggccggcgccgttgagctgtcggtgtat
cacgacgatcgccaggtctattaccaccacctgcccgcgctgtataacccgtggcgtacc
aacgataacctgcgcagcttcgagtcgccgctgctgcagcacccgggctatcgtctgaag
atggtctacattgagccgacggccagctacagccactcgctggagcgcatgttcccgctc
tcgctctccattggcgttatggtgatcatgctgtttttcgcctaccgctggctgcgtgga
cagacccaggggatcgagcggctggagcgccgggcgcgccgcattctgtccggcgatcgc
gatctgcgcgcggggggcatcggcgagtttcccgccagcgccagcagcgcgctcgactgc
ctgctcgccgagctgtccgatgcgcgcgaagagcgcagccggatagactcgctgatccgc
gcttttgccgcgcaggactcgcgcaccgggttaaacaaccgcctgtttttcgataatcag
ctgaccaccctgctggaggatgagggggcctacggcgtggtgatgatcctgcgcctgccg
gatctggaggcgctggccagccagccggggcggcgccagcgcgaagagtttcgctatgcg
ctgaccaatatgctgtcgacctatgtcatgcgctacccctctggcctgctggcccactat
tttcagaataactttgccgtgctgctgccgcatcgctcgctgaaagaggcggagggcttc
gccgcccagctgctggcctcgctggcggccatcccctcggcgccgggggtgatcgccgat
gaggtgctgcatatcgggatcaccctgtaccgcgccggcgagcaggtggagtcggtgatg
gatcgcgccgagcaggcggcacgcagcgcgaccctgcagggcggcaacggatggtttgtc
gatccgattccgcagccggagatggtgcgcggcagcgtgcgctggcgtaccctgctggag
cagaccctggcgcgcggcggggcgcggctgttccacaagcccgcggtgacggtggacggg
cgggtgcatcaccattacatcctgccgtacatctatgacggcaatcagccgatccccagc
gccgaatttatgccgctggtgcagcagttggggctggcggagcgcttcgatcgtcagatg
gtcagtcagattattccgttgttgcgtcgcctgccgggacaaaggctggcctttccgctg
acggttgactcattattacagcgtagctttcagcgctggctgcgcgacaccctgctgcag
agtgagcgcccgctgcgccgacgcatcctgatcgagctgagcgaggcggacgtctgcgcc
caccaggcgcggctgggcccgatcctgcgcctgctgcgcgggctggagtgtcaggtggtg
gtctctcaggctgggctgcgtatcgtcagcaccacctatatcaagcagctgcaggtggcg
ctggtgaagctgcatccggcgctggtgcgcaatattgaccggcgtatcgaaaaccagctg
tttgtgcagagtatcaccggcgcctgcgagggcaccgtcgcgcaggtcttcgccaccggg
gtgcgcagcaaagaggagtggcgagttctcaaagaaaaagggatcgccggcgggcagggg
gatttttttgcaaaatcacgaccggttctctag
DBGET
integrated database retrieval system
