Eutrema salsugineum (saltwater cress): EUTSA_v10024647mg
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Entry
EUTSA_v10024647mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EUTSA_v10024647mg
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EUTSA_v10024647mg
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Paralog
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
18030725
NCBI-ProteinID:
XP_006413432
UniProt:
V4LW19
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MSDQGSVRLDVKENHVVMNNGIVEVTISKPDGFVTGISYHGVNNLLESHNEDYDRGYWDL
VWSEEGTPGTTGKSERIKGKSFEVVVENEEMVEISFTRRWDSSLQDKIAPINVDKRFIMR
KNVTGFYSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFRYMAIADNRQRKMPLPEDRLGKR
GRPLAYPEAVLLVHPVEEEFKGEVDDKYEYSCENKDLKVHGWISNSLDLGCWQIIPSNEF
RSGGLSKQNLTSHVGPISLAMFISAHYAGEDMVMKVKAGESWKKVFGPVFTYLNCLPDQT
SDPLSLWQDAKNQMLIEVQSWPYDFPASEDFALSNKRGCISGRLLVRDKSLSDELLPANG
AFVGLAPPGEVGSWQTESKGYQFWTEADADGYFEINNIREGEYNLNAYVTEWIGDYQYEK
LINITAGCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIDHPDRF
RQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKLNDDTYQKTTWQIKFKLEKVQ
KNSTYKLRIALATANVAELQVRMNEEDSEKSCLFTTGVIGHDNTIARHGIHGIYRLYNVD
VPSEKLVEGDNTLFLTQAITTTGAFNGLMYDYIRLEEPFLDSNFH
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccaaggttctgttcgtttggatgtcaaagaaaaccatgtggtgatgaacaat
ggtatagtcgaagtgaccatatcaaaaccagatggttttgtcactggaatctcttaccac
ggtgtcaacaatctactagaaagtcacaatgaagattatgatcgagggtactgggacctt
gtttggagtgaagaagggacgcctggaactacagggaaatctgagcggatcaaaggtaaa
agttttgaagtagtagtggaaaatgaggaaatggtagaaatttccttcaccaggaggtgg
gattcttctctccaagacaagattgctcccatcaatgtcgacaagaggttcataatgcgt
aaaaatgtaactggattctactcatatgcaatattcgagcatctagcagaatggccagct
tttaacttgcctcagacaaggattgtttacaagcttcgtaaagacaagtttcgatatatg
gcgattgctgataacaggcagaggaaaatgccgctcccagaagatagattgggtaaaaga
ggaagacctttggcatatcctgaagctgttcttcttgttcatcctgttgaagaagagttc
aaaggagaggttgatgacaagtacgagtattcttgcgagaacaaagatcttaaagtgcac
ggatggatctcaaatagcctggatttgggttgctggcaaatcattcctagcaatgagttt
agatcaggtggcctgtcgaaacagaaccttacctctcatgttggtccaatcagtcttgct
atgtttataagtgctcactatgcgggtgaggacatggtgatgaaggtaaaagcaggggag
tcatggaagaaagtgtttggtcctgttttcacttacctcaattgtttacctgaccaaact
tctgatcctctctcgttatggcaagacgctaaaaaccagatgttaatcgaagtccaaagc
tggccttatgatttccctgcttcagaagactttgcactgtccaataagcgtggttgcatc
agcggtaggttactcgtacgcgacaaaagccttagtgatgaacttttaccggcaaatggt
gctttcgtaggtttggcaccaccaggagaggttggatcctggcaaacagaatctaaggga
tatcaattctggacagaagcagatgcagatggttatttcgagataaataacatccgagaa
ggtgaatataatctcaatgcttatgtgacagaatggattggagactatcaatatgagaaa
ttgattaacattacagcaggctgcgacattgacgttggcaatatcgtgtatgaaccgccc
cgagatgggccaacggtgtgggaaattggaatccctgacaggtccgcagctgagttcttt
gttccagacccaaatcctaagtacatcaacaaactatatattgatcatcctgataggttt
aggcaatacgggctatgggaaagatacacagaactatatcctaaggaggatttggtgttc
actattggcgtcagtgactacaaaaaagactggttctttgcacacgttaccaggaaacta
aacgatgacacatatcaaaaaacgacatggcaaatcaagttcaagctcgagaaggtgcag
aaaaacagcacatacaaactccggatcgcactagcaaccgcaaatgtagcagaactacaa
gtgaggatgaatgaggaagacagtgaaaagagctgccttttcacaacaggtgtaatcgga
cacgataacacgattgcaagacatgggatacatggaatctatagactctataatgtggat
gtaccaagtgagaagcttgtcgaaggagacaacactttgttcttgacacaagccatcacc
accactggagcttttaatggtctcatgtacgactatatccgcctcgaagaacctttttta
gattcaaactttcactaa
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