Ficedula albicollis (collared flycatcher): 101807035
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Entry
101807035 CDS
T02815
Symbol
NUP93
Name
(RefSeq) nucleoporin 93
KO
K14309
nuclear pore complex protein Nup93
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101807035 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101807035 (NUP93)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101807035 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
RP854
Motif
Other DBs
NCBI-GeneID:
101807035
NCBI-ProteinID:
XP_005052586
UniProt:
U3JYH1
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All DBs
Position
11:complement(8682578..8762044)
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AA seq
819 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSKGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRR
TFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENEPSYVGEVGPPGRSSLDS
VEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASD
ALKVRTNMEVRMEFVKHALHYLEESYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKD
RRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQ
VCFDDGGTSAPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKASGQSAQLLSHEAGDPPGVRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDK
FTSDTKSIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPIVPQISTPQSNK
ERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLV
PLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMED
RDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacacggagggctttggagagctgctgcagcaggcagagcagctggcagcggagaca
gaagggatctcggagctgccgcacgtggagcgcaacctgcaggagatccagcaggcgggg
gagcggctgcgctcgcgcaccctgacccgcacctcgcaggagactgcggatgtgaaggcg
tcggttcttcttgggtctaaaggccttgatatatcccacatttctcagaggcttgagagt
ctaagtgcagccactacatttgagcctcttgaacctgtgaaggacactgacatccaggga
ttcctgaagaatgaaaaagataatgcattgctgtctgcaattgaagagtccaggaggagg
acttttgccatggctgaggagtatcaccgagaatcaatgctggttgaatgggaacaggtg
aaacaaaggattcttcattctctgcttgcatcaggggaagatgctcttgatttcacccag
gaaaatgagcccagctatgttggtgaggtgggtcctccaggtcgcagctctttggacagt
gtggagatggcatatgctcgtcagatttatatttataatgagaagatagtgaatggacat
ctgcagcccaacctggtggacctttgtgctgctactgcaggcctggatgataagaacatc
tctgagatgtgggccatggtgaaacaaatgaccgacgtcaccctggttcctgccagcgat
gccctgaaagtccggaccaacatggaggtgcgcatggagttcgtgaagcacgccctgcac
tacctggaggaaagttacaaaaattacacttttgtgacagtctttggaaacttgcaccag
gctcagctgggtggagtcccgggcacctaccagctggtgcgcagcttcctgaacatcaag
ctcccagcgtctgtccctggtctgcaggatggtgaggtggagggccatcctgtgtgggca
ctgatttactactgcatgcgctgcggagatctgactgcagccatgcacgtggtgaaacgg
gcacagcaccagctgggagagttcaaaacctggttccaggagtacatgcacagtaaggac
agaagattgtctcctgccacagaaaataaactgcgtcttcattacagacgagctctgaga
aataacactgacccctacaaaagggctgtttattgtattattggccgttgtgacattaca
gacaaccagagtgaagttgctgataaaacagaagattatctttggctaaaactgaaccaa
gtgtgttttgatgatggtggcacgagtgccccacaggaccggctaacgttatcacagttc
cagaagcagctgctggaagactatggtgaatcacattttgcagtgaaccagccacctttc
ctctacttccaggtgttgttcttgacagcacagtttgaagctgcaattgcttttcttttc
cggacagagcgcttgcgctgtcacgctgttcatgttgctttggtcctgtttgagttaaaa
ttgctcctgaaagcatctgggcagagtgcacagctattaagccatgaagctggtgaccct
cctggtgtcagacgtttaaattttgtgcggcttctgatgctttacacccgtaagttcgaa
tcaacagatccaagggaagctctgcagtacttttactttctcaggaacgagaaggacagc
caaggagagaacatgttcttgcgttgcgttagtgaaatagtaattgaaagcagagagttt
gatatgattcttggaaagctggaaaaggatggtagtaggaagcctggagttatagacaag
tttacaagtgacacaaaatccattattaacaaagtggcttctgcagcagaaaataaagga
ttgtttgaagaagctgcaaaactctatgaccttgcaaagaaccctgacaaagttttagaa
ctgatgaacaagctccttagtccaattgttccccagatcagcactccccagtcaaacaag
gagcggttgaagaacatggcccattccattgctgagaggtacaaagcgcaggggataagt
gcaaagaaatccattgactccacgttctaccttctgctagacttaatcacattttttgat
gaatatcacgctggtcatgttgacagggcctttgatattattgaacgcctgaagctcgta
cctcttagccaggattgtgtcaaggagagagtcgctgccttccggaatttcagtgatgaa
atcaaacacaatttatctgaagtcctgcttgcaaccatgaatattttattcaccaagtat
aagaggatgaaagggacgagcccaaccactcctgccagaccccagcgggtaatggaagac
agagattcgcaactgcagtctcaagctcgggcactgataatgtttgctgggatgatccca
tacagaacatcaggagacacgaatgcaagactggtgcaaatggagatccttatgaattag
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