Ficedula albicollis (collared flycatcher): 101811147
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Entry
101811147 CDS
T02815
Symbol
HERC4
Name
(RefSeq) HECT and RLD domain containing E3 ubiquitin protein ligase 4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101811147 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101811147 (HERC4)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101811147 (HERC4)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
HECT type E3
101811147 (HERC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
101811147
NCBI-ProteinID:
XP_005047975
UniProt:
U3KEQ6
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Position
6:complement(1001948..1040095)
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AA seq
1056 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEVVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHDKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECVRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS
PQVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR
SQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWIPYSPQSPMSTDTEE
CYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVNETFIQRLLSFPSGRLPV
EIAIEIDGAFSSAGCLNGSFLALSNDDHYKTSTRFSGVDMNAARLLFHKLIQPEHAHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDENNFTTLAIPFGAAILNLEKAP
LKVLENWWSVLEPPLFLKIVELYKDVVVHLLKLCKMGLPPSDRRILTNFLHTAFRVLEIL
HRVNERGQVIQYDRFYIHEIQDLIDIRNDYANWFQQQVLGMDVNHGLTELTDIPVIICTY
PFVFDAQAKTTLLQTDAIIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPKGADIPVVKQNRQDFVDAYV
DYIFNRSVASLYSAFHEGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEDYLPV
AHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggcaatgcatcttttggacagcttggattgggtggaattgatgaagag
gttgttttagaacccagaaaaagtgactttttcctaaataaaagggtcagagatgtagga
tgtggactgagacatactgtttttgtcctggatgatgggactgtttatacatgtggatgc
aacgatctaggacaactaggccatgacaaagccagaaaaagacctgagcatgttggtgca
ctggatgcccaaaatattgtagctgtgtcatgtggagaagcccacactcttgcattaaat
gacaaaggtcaggtgtatgcttggggtctggctactgatggacagcttggcttgccagga
acagaggaatgcgtcagagtgcccagaaatattaaaagcttgtcagagatccagattgtt
caagttgcttgtggttattatcactcgctagcactctcaaaaggaagtgaagtgttttcc
tggggacaaaacaaatatggccagctgggcttaggttatgagtataaaaaacaaacctca
ccacaagtgattaaatctctgctgggaatcccttttgcacagattgcagcaggaggagct
catagttttgtactcactctttccggagccatcttcggatggggacgcaacaaatttggg
cagctgggtctaaatgatgataatgacaggtatgttcctacactgctgaagtccctgaga
agtcagaaggttgttcatatatgttgtggagaagatcatactgctgcccttacaaaggaa
ggtggggtttttacatttggagctggaggctatggtcagttgggtcataactctaccagc
catgagataaatccaaggaaagtttttgagcttatgggaagtgttgtcacacagatcacc
tgtggcaggcagcacaccactgcatttgtcccttcttctggaagaatttactcttttggg
ctcggaggcaacgggcagttagggacagggaccaccagtaacaggaaaagtcccttcaca
gtgaaaggaagctggattccctatagtccccagagcccaatgagcacagacactgaggag
tgctactgtgtaaagagaattttctctggtggggaccaaagttttgcacactacttttat
ccacagaacatggtgccaccagatgattttaggtatcctgaccttttgaagcagatctgg
actgtgaatgaaacgtttattcagagattgctgagtttcccatctggaagacttcctgta
gagatagctattgaaattgatggagcattctcctcagctgggtgcctgaatgggagcttt
ttggcattgagcaatgatgatcattacaaaaccagcactagattctcaggggttgatatg
aatgctgctagactactctttcacaaactcatacagcctgagcatgctcacatatcccaa
caggtggcagctagtctggaaaagaaccttattcccaaattgaccagctccttaccagat
gttgaagctttgaggctgtatctcactctgccagagtgcccactgatgagtgatgagaac
aatttcacaacgttagctattccttttggagcagctattctgaacctagaaaaagctcct
ctgaaagttcttgaaaattggtggtctgtacttgaacctcccttgttcctcaagatagtg
gaactctacaaggatgtcgtagtgcaccttttgaagctgtgcaagatgggccttccacct
tctgacagaagaatactcaccaatttcctgcacacagccttcagagttctggaaatactg
cacagagtgaatgaaagaggacaagtgatacagtatgacagattttacattcatgagata
caagatctaatagatatcagaaatgactatgccaactggttccagcagcaggtactggga
atggatgtcaaccatggattaactgagttaacagatattcctgttataatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcttgcaaacagatgcaatcatacag
atgcagatggctgttgatcaggcccacaggcagaatttgtcttctctcttcctgccagta
tttgagtctgtcaatccctgcctgatactgatggtccggagggacaacatagtaggggat
gctgtggaggtcctcaggaaaacaaagaatgttgactacaagaagcctctcaaggtgatt
tttgtcggggaggaagctgtcgatgctggaggagttcgcaaagaattctttctgctcatc
atgagggagttgctagatcccaagtatggaatgttcaggtattatgaggagtccaggctg
atctggttctctgataagacctttgaagacagtgacttgtttcatttgattggtgttgtc
tgtgggctagcaatatataattttactattgtagaccttcattttcctctggctttgtac
aaaaagctattgaataagaaaccatccctggatgacttaaaagaattgatgccagatgtt
ggcaggggaatgcaacagctactggactatccagaggatgacatagaagaagcattttgt
cttaattttactatcactgtggaaaattttggtacaacagaaattaaggagcttgttcct
aaaggtgctgacattcctgtagtcaaacaaaataggcaagattttgtagatgcatatgtg
gattacatcttcaatagatctgtggcttccttatacagtgcattccatgaaggcttccac
aaagtgtgtggaggtaaagttcttcagctcttccagcccagcgagttgcaggcaatggtg
attgggaacacaaattatgactggaaagagctggagaagaatacagagtacaaaggagag
tactgggcagaccatcctacaattaaaatattctgggaggtttttcacgagttgtctttg
gagaagaaaaaacagtttttgttgtttctgacaggcagtgatcggattccaatccttggg
atgaagtgtctgaagctggtcatccagccaacaggaggaggagaggattacctgccagta
gctcacacttgctttaatctgcttgatcttccaaaatacacagataaagaaaccctgaaa
tctaagttgatccaagctatagaccactatgaaggtttcagtttagtataa
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integrated database retrieval system