KEGG   Ficedula albicollis (collared flycatcher): 101811147
Entry
101811147         CDS       T02815                                 
Symbol
HERC4
Name
(RefSeq) HECT and RLD domain containing E3 ubiquitin protein ligase 4
  KO
K10615  E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101811147 (HERC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fab04121]
    101811147 (HERC4)
Enzymes [BR:fab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     101811147 (HERC4)
Ubiquitin system [BR:fab04121]
 Ubiquitin ligases (E3)
  HECT type E3
   101811147 (HERC4)
SSDB
Motif
Pfam: RCC1 HECT RCC1_2
Other DBs
NCBI-GeneID: 101811147
NCBI-ProteinID: XP_005047975
UniProt: U3KEQ6
LinkDB
Position
6:complement(1001948..1040095)
AA seq 1056 aa
MLCWGNASFGQLGLGGIDEEVVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHDKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECVRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS
PQVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR
SQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWIPYSPQSPMSTDTEE
CYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVNETFIQRLLSFPSGRLPV
EIAIEIDGAFSSAGCLNGSFLALSNDDHYKTSTRFSGVDMNAARLLFHKLIQPEHAHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDENNFTTLAIPFGAAILNLEKAP
LKVLENWWSVLEPPLFLKIVELYKDVVVHLLKLCKMGLPPSDRRILTNFLHTAFRVLEIL
HRVNERGQVIQYDRFYIHEIQDLIDIRNDYANWFQQQVLGMDVNHGLTELTDIPVIICTY
PFVFDAQAKTTLLQTDAIIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPKGADIPVVKQNRQDFVDAYV
DYIFNRSVASLYSAFHEGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEDYLPV
AHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgttgtgctggggcaatgcatcttttggacagcttggattgggtggaattgatgaagag
gttgttttagaacccagaaaaagtgactttttcctaaataaaagggtcagagatgtagga
tgtggactgagacatactgtttttgtcctggatgatgggactgtttatacatgtggatgc
aacgatctaggacaactaggccatgacaaagccagaaaaagacctgagcatgttggtgca
ctggatgcccaaaatattgtagctgtgtcatgtggagaagcccacactcttgcattaaat
gacaaaggtcaggtgtatgcttggggtctggctactgatggacagcttggcttgccagga
acagaggaatgcgtcagagtgcccagaaatattaaaagcttgtcagagatccagattgtt
caagttgcttgtggttattatcactcgctagcactctcaaaaggaagtgaagtgttttcc
tggggacaaaacaaatatggccagctgggcttaggttatgagtataaaaaacaaacctca
ccacaagtgattaaatctctgctgggaatcccttttgcacagattgcagcaggaggagct
catagttttgtactcactctttccggagccatcttcggatggggacgcaacaaatttggg
cagctgggtctaaatgatgataatgacaggtatgttcctacactgctgaagtccctgaga
agtcagaaggttgttcatatatgttgtggagaagatcatactgctgcccttacaaaggaa
ggtggggtttttacatttggagctggaggctatggtcagttgggtcataactctaccagc
catgagataaatccaaggaaagtttttgagcttatgggaagtgttgtcacacagatcacc
tgtggcaggcagcacaccactgcatttgtcccttcttctggaagaatttactcttttggg
ctcggaggcaacgggcagttagggacagggaccaccagtaacaggaaaagtcccttcaca
gtgaaaggaagctggattccctatagtccccagagcccaatgagcacagacactgaggag
tgctactgtgtaaagagaattttctctggtggggaccaaagttttgcacactacttttat
ccacagaacatggtgccaccagatgattttaggtatcctgaccttttgaagcagatctgg
actgtgaatgaaacgtttattcagagattgctgagtttcccatctggaagacttcctgta
gagatagctattgaaattgatggagcattctcctcagctgggtgcctgaatgggagcttt
ttggcattgagcaatgatgatcattacaaaaccagcactagattctcaggggttgatatg
aatgctgctagactactctttcacaaactcatacagcctgagcatgctcacatatcccaa
caggtggcagctagtctggaaaagaaccttattcccaaattgaccagctccttaccagat
gttgaagctttgaggctgtatctcactctgccagagtgcccactgatgagtgatgagaac
aatttcacaacgttagctattccttttggagcagctattctgaacctagaaaaagctcct
ctgaaagttcttgaaaattggtggtctgtacttgaacctcccttgttcctcaagatagtg
gaactctacaaggatgtcgtagtgcaccttttgaagctgtgcaagatgggccttccacct
tctgacagaagaatactcaccaatttcctgcacacagccttcagagttctggaaatactg
cacagagtgaatgaaagaggacaagtgatacagtatgacagattttacattcatgagata
caagatctaatagatatcagaaatgactatgccaactggttccagcagcaggtactggga
atggatgtcaaccatggattaactgagttaacagatattcctgttataatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcttgcaaacagatgcaatcatacag
atgcagatggctgttgatcaggcccacaggcagaatttgtcttctctcttcctgccagta
tttgagtctgtcaatccctgcctgatactgatggtccggagggacaacatagtaggggat
gctgtggaggtcctcaggaaaacaaagaatgttgactacaagaagcctctcaaggtgatt
tttgtcggggaggaagctgtcgatgctggaggagttcgcaaagaattctttctgctcatc
atgagggagttgctagatcccaagtatggaatgttcaggtattatgaggagtccaggctg
atctggttctctgataagacctttgaagacagtgacttgtttcatttgattggtgttgtc
tgtgggctagcaatatataattttactattgtagaccttcattttcctctggctttgtac
aaaaagctattgaataagaaaccatccctggatgacttaaaagaattgatgccagatgtt
ggcaggggaatgcaacagctactggactatccagaggatgacatagaagaagcattttgt
cttaattttactatcactgtggaaaattttggtacaacagaaattaaggagcttgttcct
aaaggtgctgacattcctgtagtcaaacaaaataggcaagattttgtagatgcatatgtg
gattacatcttcaatagatctgtggcttccttatacagtgcattccatgaaggcttccac
aaagtgtgtggaggtaaagttcttcagctcttccagcccagcgagttgcaggcaatggtg
attgggaacacaaattatgactggaaagagctggagaagaatacagagtacaaaggagag
tactgggcagaccatcctacaattaaaatattctgggaggtttttcacgagttgtctttg
gagaagaaaaaacagtttttgttgtttctgacaggcagtgatcggattccaatccttggg
atgaagtgtctgaagctggtcatccagccaacaggaggaggagaggattacctgccagta
gctcacacttgctttaatctgcttgatcttccaaaatacacagataaagaaaccctgaaa
tctaagttgatccaagctatagaccactatgaaggtttcagtttagtataa

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