Ficedula albicollis (collared flycatcher): 101820783
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Entry
101820783 CDS
T02815
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101820783 (TTF2)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101820783 (TTF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
101820783
NCBI-ProteinID:
XP_016152010
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Position
1:99385337..99404311
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AA seq
1230 aa
AA seq
DB search
MSEGHTRDEPARRGSWSRFQHGAVSRARRGSIRTGRDPGHAHSHAPAASLFPPSGARGPS
ALLRSAGSLCFLKTGVRDGPNKGKSFYVCGTHSSAACGFVLPAPVPASHCLIHEGCVVEL
QVLVQQPDRDEYQLFYRCLKSKLSGKKWCGNVPWQDPKANKVSKPLESQPRPVPFFNPTS
QRNPFKVLDKNCAPSSWKQMKQRNGEESKEKGVNAENENVLVSHQEKKSTSDSSIETVPL
EELKNKKKTSTESKSDPELQETKVSESKLCLSETRKGKNTISEEEKYGGSGRESKKPSDS
VGKEPGARSKLLPLDLGKQSKSTKPPGEEQLGEESLKSCRDKETREKDGTGQKNGEMKPA
SKEDVPSPAGAQSASQCPTLRGGAEAELLKAQLGPGLLPQPPGEASGSDTDEIQFVYSSS
GKSKPEKSVEIPSGKSGKSVQGTSLPEAAASHHMEGPQDPKVLHNQLVVQLKQKKSTLAT
VNVQLLPDKGKRLLKQVQDLEAALSALNISTADTTEKGQDSTSSSCHEEALSNPVGRPGG
TKLITPLPLQDPTAKASPGSHSHPLGAATLGSSGQSFGMSVGVQNLYGGRMTGDRIRAVH
SATFEAINHLHKSLESCPTEETAAEDPSGLKVPLLQHQKQALAWLLWRESQRPCGGILAD
DMGLGKTLTMIALILAQKQLKTEKRKETLEIWLSKNDFTVVPSHGTLIICPASLIHHWKK
EIEKRVAFGKLRVYLYHGPNRDKHAEVLSGYDVVVTTYSLLSKEIPTSKEEGEVPAQDYD
VGSGSSPCSPLLRVAWARIILDEAHNIKNPRVQTSIAVCKLRASARWAVTGTPIQNNLLD
MYSLLRFLRCSPFDEYKVWKYQVDNNTRKGGERLSLLTRSLLLQRTKDQLDSAGKPLVSL
PQRSTRLHQLKLTAEEQSVYNVLFARSRSTLQSYLKRQEQKNEGREYDGANPFEKVAQGF
GVSQKEFLAGSQSASQVSSTVHVLSMLLRLRQCCCHLSLLKMALDQVNLNSEGLALSIEE
QLGALTLSELQTPDSKSTVYLNGTAFHTDIFDITRESTKITQLLAELKTIQSHSEPQKSV
VVSQWTSMLQVVAVHLKRLGLKYATVDGSVNPKQRMDVVEEFNNNPKGPQVILVSLLAGG
VGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQRKDVVIHRFVCEGTVEEKILQLQKR
KKGLAQQVLSGKGETSTKLTLADLKILFGI
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagggcacacacgagatgagcctgcccggcgcggcagctggagccgtttccag
cacggggcggtgtcccgggcgcggcgcggctccatccgcaccgggcgggatccaggccac
gcccatagccacgcgcccgcagcatctctgttcccgccctcgggggcgcgcggtccttcc
gcacttctccgctccgcagggtccctctgcttcctgaaaacgggcgtccgcgatggcccc
aacaaagggaagagtttctacgtgtgcgggactcacagctccgctgcctgcggcttcgtc
ctcccagcgccggttcctgcttctcactgcttgatccatgagggatgcgtggtggagctg
caagtcctggttcagcagccggacagagatgaataccagttgttttaccggtgccttaag
agtaagttgagtgggaagaaatggtgtggaaatgtcccatggcaggatccaaaggctaac
aaagtgtcaaaacccttggaatcccagcccagaccagtgcctttcttcaatcctactagc
caaagaaatccattcaaagtgctagacaagaattgtgcaccatcatcctggaaacaaatg
aagcaaagaaatggagaggaaagtaaagaaaaaggagttaatgcagagaatgagaatgtg
ctggtgtcacatcaagaaaagaaatcaacctctgattcctccatagagacagtacctctt
gaagagctcaaaaataaaaagaaaacatccacagaaagtaaaagtgacccagaacttcag
gagactaaagtgtctgaatctaaactttgtctttctgagaccaggaaagggaaaaataca
atttcagaggaagagaaatatggtggcagtggcagggaatccaagaaaccttctgattct
gtgggcaaggagccaggcgcaagatcaaaactcttgccgctagatcttggaaagcaaagt
aaaagtaccaagcctccaggggaggagcagcttggagaagaaagcttaaaaagttgtagg
gataaagaaacaagagagaaagatggcactggtcagaagaatggtgaaatgaaaccagcg
tctaaggaagatgtcccttccccagcaggagcacagtcggcatcgcagtgccctaccctg
aggggaggggcagaggcagagctgctcaaggcacagctcgggccagggctgctgccacag
cctcctggtgaagcctctggtagtgacactgatgaaatacaatttgtttattcctcatca
ggtaaaagtaaacctgagaaatcagttgagattccttcaggaaaatcaggaaagagtgtg
caggggacatctttgccagaagcagcagcatcacatcacatggaaggaccccaggaccct
aaagtgcttcataaccaacttgtagtccagctgaaacagaaaaagagtacattggctaca
gtgaatgttcagttgctgccggataaagggaaacggttattaaagcaagtgcaggatttg
gaagctgcactgagtgctcttaacatttcaacagcagatactactgaaaaagggcaggat
agcacaagcagcagctgccatgaagaagctttgtctaacccagttggcaggccaggtggt
acgaagttgataacgccactcccactccaggatcctacagcaaaggcctctccaggctca
cacagtcaccccttgggtgctgctactttgggttccagtggccaaagttttggaatgagt
gttggtgtgcagaatctgtatgggggaagaatgacaggagaccgaatcagggctgtacac
agtgccacatttgaggctattaatcatcttcacaaatctctagaatcctgtccaacagag
gagacagcagctgaagatccctctggactgaaggtcccactgctgcagcaccagaaacag
gcgcttgcatggctcctctggagagagagtcagaggccgtgtggaggaattctggcggat
gacatgggcttggggaagactctaacgatgattgctctcattctggctcagaagcagctg
aagacagaaaaaagaaaggagacgttagaaatatggctatccaaaaatgacttcactgtt
gtcccttcccatggcactttaatcatttgtcctgcatccttgatccatcactggaagaaa
gagattgagaaacgcgtggcctttggcaaactgagagtttatttgtaccatgggccaaat
cgagataagcatgcagaggtgctttctggatatgatgttgttgtcacaacctacagcctt
ctctccaaggagattcctacaagcaaagaggagggagaagtccctgctcaggactatgat
gtggggagtggatcatctccctgttcccctctgctcagggtagcttgggctcgaattata
ttggatgaagctcacaatattaaaaacccacgggttcaaacctctatagctgtgtgcaaa
ctgagagccagtgccagatgggctgtcactgggacaccgatacagaacaacttgctggac
atgtactctctcctgaggtttctacgttgctctccttttgatgaatacaaagtgtggaag
taccaggtagataacaacacaaggaagggaggggagaggctgagcctcttaaccaggagc
ctcttactacagagaactaaggaccagctggattcagctggcaagcccctggtatctctg
ccccagcgtagcacgcgcttgcatcagttaaaacttacagcagaggagcagtctgtgtac
aatgtgctctttgcaagatccaggtcaacactacagtcctacctaaagagacaagaacag
aaaaatgaaggcagagagtatgatggtgctaacccctttgagaaagttgcacaagggttt
ggagtcagtcaaaaggaatttctagcaggctcacaaagtgcatcccaggtctcaagtact
gtccatgtcttatccatgctcttgaggctccgtcagtgctgctgccatctctccttactg
aaaatggctctggatcaagttaacttgaacagcgaaggccttgcactctccattgaggaa
cagcttggtgctctgacactgtccgagctccagactcctgattccaaatcaacagtctac
ctcaatggcacagcttttcacacagacatctttgacatcaccagggagagcaccaagata
actcaactcctggccgaattgaaaactattcagagtcactcagagcctcagaaaagcgtg
gttgtctctcagtggacaagcatgctccaagttgtggccgtgcacctgaagcgcctgggg
ctgaagtacgccacggtggatggctctgtcaatcccaaacagaggatggatgtggtggaa
gagttcaataacaatcccaaagggcctcaggtaattttggtctcgttgctggctggaggc
gttggcctgaacttgactggaggaaaccatctctttctccttgacatgcactggaatcct
gctctggaggaccaggcctgtgaccgcatctaccgtgtggggcagcggaaggatgttgtg
atacacaggtttgtctgtgaaggaacagtagaagaaaagatcctgcaactccagaagagg
aagaaaggtcttgcccagcaggttctatcaggcaaaggagagacctccactaagctcact
ctggctgacctcaaaattctctttggtatctaa
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