Frankia alni: FRAAL3954
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Entry
FRAAL3954 CDS
T00384
Name
(GenBank) hypothetical protein
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TIR_2
ANAPC4_WD40
NACHT
Pentapeptide
Nbas_N
Ge1_WD40
AAA_22
Pentapeptide_4
Motif
Other DBs
NCBI-ProteinID:
CAJ62597
RhizoBase:
FRAAL3954
UniProt:
Q0RIR9
LinkDB
All DBs
Position
complement(4249924..4254975)
Genome browser
AA seq
1683 aa
AA seq
DB search
MWVASGDDDGPGRATRTFFVSYVRENEAWAEWIAWQLREAGWQVDVQAWHSVPGTNVVAW
LDRCLARADHVLLVLSAAFLRSAGAGAEWQARFDPGERTLIPIRVELCAPPGLLSPLVRI
DLFDVDELDARRALLRGLRGALDGHLVPAGQPPFPPGGGLPGEGSDLGEGKDLNEGSQLA
QPGQPRAGAEPGTLGEAAGTPGPEFPGLERPESFVGWVRDACADRYPGASVVLQPAVETR
VGERAVSLLHLEVTGERDGERGVWPVGLCPGRPDRALVSAFHRLIHARYEARDRYVESDL
VYGAGFAEPEVRRWARRQGIRLSSLAEFEGRWDPQGYVLRQTRRLTADPSYPPELYVPQR
YVLLDDPPGTRPTDDVFTAMVDWLDVESARMLLVLGEFGHGKSFLLHELARVLPLELPKV
VPMLVELRALEKSHHVDHLLALHLAKVGEPDANVSAVRRMLDRGRVVLLFDGFDELAQRV
TFDRAAEHLGMILDAVSGRAKIVLTSRTQHFASDDQWRTAFGERVRQLAGSKLIRLADFD
ESQIREYLVRLSTRAERTGADPGGAWPSDGFDAAERRQRAEWRADARLRLIHDIRDLLGL
SANPRMLSFIAELPEGDLLAARSDDGTISSADLYATLIERWLRFEADRRRPTRGSHQSLD
RKQLRTAVDALAVALWDSGGEAIALSELTATVGAALTDLSAAYLSAAEAAFAVGSGSLLR
RGDDDRFSFAHRSVMEYLVAVAAAAQLAAGGDEAGELLERREMSELMVDFLAGTADFVSL
RTWAGAALTRYEEWTEEGAQLGVDRELPVPARALTDLQVARDNALALSRRLGFQLGPLQL
AGQDLRRRDLSGQNLRYAGLAGANLAGLRLHDVDLTGADLTDADLRGAWFVRPVLTGAHL
AGSHWDQAVLIDPLLDDDARDGAELSGAVLSGRDLLRPVLRPAATPGVGSVFSPDAGLLA
VASGSAVLIVAATDLVELDVLQHPAAVRAMAFLAEDRLATVDGDDEVRVWTVESGEVTVR
WRVTPGVGRAVAFCADGSRLAAVGVDGFLRIWDVTAARRTAGWPVEPGTGHDLVFSDDAA
LLASRDAGGCTRVWDAVSGRPVAAWTAHDGTEPHINAFLDGGSRVATAGLDGYLRVWDTA
TGRFLAEQVVEPAGFAEVAFSADGAFMAAVDTHGLLRVWPVSMAGAVIPRGVPTLAAVAT
RPAFSPSGALLATVDRDGHLEARDVSSGRLLAVSKDHPAAAAGRSALFASDTRVLVTCAG
RAAEGTLAVHQVASGRRISGHGVARALDPDTGLHISADTWLAALSADGSVSALGGLDHHD
ANQISVVRLLPPNWAARPWARYLPPPTVLTTVRPPGGVTAAALSPDGRVLAVGDDQGHVR
FFGVDLPVARAGLRRSAAHATGPRAHLAWAAAPWTEAVLAAYGSQGPSTPIRSLVFSPSG
PDVAVVGEAGLSLWRPTQRLPLFERAAAIEPVAVTFSPTGRMVAAGGSGIGVWMSETGFR
LVANASPALTNGSVSALAFSPDERLLAVGGQRHGQGRVWLWEVSSGRLAAELVSESGPVV
DLVFAPGGRTLAVAGADHTIRYWDVAERALAATAVLFGNGGHAVLLPNGQYLVAGWAQGA
LWWTAKRRRFGPDELDGLIPAAARLDPDRPIPILADFPALAADPDPEPSVHRPRRRLLGR
RHP
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
ttgtgggtggcttcgggggacgacgatgggccaggcagggcgacgcgaacattcttcgtc
agttatgtgcgcgagaacgaggcgtgggcggaatggatcgcctggcagcttcgcgaggcc
ggctggcaggtggacgtgcaggcctggcattccgtgccagggacgaacgtcgtcgcgtgg
ctggaccgctgcctggcccgggccgaccatgtgctgctcgtcctctcggcggcgttcctg
cgctccgccggggcgggcgccgagtggcaggcgcgcttcgaccccggggagcgcaccctc
atcccgatccgggtcgagctgtgcgcaccgccggggctgctgagcccgctcgtccggatc
gacctgttcgacgtcgatgagctcgatgcccgccgggcgctgctgcggggactccgcggc
gccctcgacggccatctcgtccccgccgggcagccgccctttccgccgggtggcggcctg
ccgggcgaggggagcgatctgggcgaggggaaagatctgaatgaggggagccagctggcg
cagcccggccagccgcgcgctggcgccgagcccggcaccctgggcgaggccgctggaacg
ccggggccggagttcccggggctggagcggccggagtccttcgtgggctgggtgcgtgac
gcctgcgccgatcggtaccccggcgcgtcggtcgtcctgcagcccgccgtcgagacgcgg
gtcggtgagcgggccgtgtcactgctgcatctggaggtcaccggggaacgggatggcgaa
cgcggcgtctggccggtcgggctgtgccccggccgcccggatcgggccctggtcagcgcc
ttccaccggctgatccatgcccggtacgaggcgcgggaccgctatgtcgagtcggacctc
gtctacggcgccgggttcgccgaacccgaggtgcggcgctgggcccgccggcagggcatc
cggctgagcagcctcgccgagttcgaagggcgctgggatccgcagggctacgtcctgcgc
cagacgcgacggctgacggcggacccgagttacccgcccgagctgtacgtgccgcagcgc
tacgtcctgctcgacgatccgccgggcacccggcccaccgacgacgtgttcaccgcgatg
gtcgactggttggacgtggagtcggcgcggatgctgctcgtgctcggcgagttcgggcac
ggcaagtcgttcctgctgcacgaactggcccgggtgctgccgttggaactacccaaagtc
gtcccgatgttggtcgagctgcgggccctggagaagagccaccacgtggaccatctgctc
gcactgcatctggcgaaggtcggcgagccggacgcgaacgtgtccgcggtgcggcgcatg
ctggaccgcggccgggtggtgctgctgttcgacggcttcgacgagctggcccagcgggtg
accttcgaccgggccgccgagcacctggggatgatcctcgacgcggtgtccggccgggcc
aagatcgtgctgaccagccgcacccagcacttcgcctcggacgaccagtggcggaccgcg
ttcggcgagcgggtgcgccagctcgccggcagcaagctgatccggctcgccgacttcgac
gagagtcagatccgcgagtacctcgtccgcctgtccacccgcgccgagcggaccggcgcc
gaccccggcggggcttggccgagcgacgggttcgacgcggccgagcggcggcagcgggcc
gagtggcgcgccgacgcgcggcttcgcctcatccacgacatccgcgacctgctcggactc
tcggcgaatccccggatgttgtccttcatcgccgagctgcccgagggcgatctgctcgcc
gcccgctctgacgacgggacgatcagctccgcggacctctacgccacgctgatcgagcgg
tggttgcgcttcgaggccgaccgccgccgtcccacccgcggatcgcaccagagcctcgac
aggaaacagctacgcaccgccgtcgatgccctcgccgtcgcgttgtgggacagcggcggg
gaggccatcgcgctgagcgaactcaccgccaccgttggagccgcgctgaccgatctgagc
gcggcctacctcagcgccgcggaggcggcgttcgcggtcggttcgggcagcctgctgcgc
cgcggcgacgacgaccggttctccttcgcgcaccgctccgtgatggagtacctggtcgcc
gtggcggcggccgcgcagctcgccgccggcggcgacgaggccggcgagctgttggaacgc
cgggagatgtcggagctgatggtcgacttcctcgccggcacggccgacttcgtctcgctg
cgcacctgggccggtgccgcgttgacccgctatgaggagtggacggaggagggcgcgcag
ctgggggtcgaccgggagctgccggttccggccagggcgctgactgacctccaggtggcc
agagacaacgccctcgcgctcagccgccgcctcggcttccagctcggccccctccagctc
gccgggcaggacctgcgccgccgcgacctgtccgggcagaatctgcggtacgccgggctc
gccggggcgaacctggccgggctgcgcctgcacgacgtcgacctgaccggtgcggacctc
accgacgccgacctgcgcggggcgtggttcgtccggccggtgctgaccggggcacacctg
gccggcagccactgggaccaggccgtcctgatcgatcccctccttgacgacgacgcccgc
gacggcgccgaactgtccggcgccgtcctctccggccgtgacctcctacggcccgtcctg
cgtccggcggccactcccggcgtgggttccgtgttctccccggacgccggcctgctcgcc
gtggccagcggctccgcggtgctgatagtggccgcaaccgatctcgtggagctcgacgtc
ctgcagcacccggccgccgtgcgggcgatggccttcctcgccgaggatcggctcgccacc
gtcgacggggacgacgaggtgcgggtctggacggtggaatccggcgaggtcaccgtccgc
tggcgggtcacgccgggtgtggggcgggcggtggccttctgcgcagacgggagccgcctg
gccgccgtcggggtcgacggcttcctgcggatctgggacgtcacggcggcccgtcggacg
gcgggctggccggtcgaacccggcacgggtcacgacctggtgttctccgacgatgcggct
ctgctcgcctcccgcgacgccggtgggtgcacgagggtgtgggacgcggtcagcggccgg
ccggtggccgcatggaccgcgcatgacggcaccgagccgcacatcaacgccttcctcgac
ggcgggagccgggtggctaccgccggcctcgacggctacctgcgggtgtgggacacggcc
accggccggttcctcgccgaacaggtcgtcgaacctgccggcttcgccgaggtggccttc
tccgcggacggcgcgttcatggctgcggtcgacacccacggtctcctacgggtctggcct
gtctcgatggccggcgctgtgatccccagaggcgtgccgaccctcgccgcagtggcaacc
cggcccgcgttctctccgtcgggcgctctgctggcgacagtcgaccgtgatgggcatctg
gaggcccgcgacgtctcttcgggaaggctgctcgcggtctcgaaggatcacccggctgcg
gcagcaggccggagtgccctgttcgcctcggacactcgggtgctggtaacttgcgccggc
cgggctgcggagggcacgctcgcggtgcaccaggtcgcctcgggtcgacggatctccggc
cacggcgtggcgcgtgctctcgacccggataccggcctgcacatcagcgccgacacctgg
cttgccgccctctctgcggatggctcggtaagcgcgctcggcggcctcgaccaccacgat
gccaaccagatcagcgtggtacgactcctaccgccgaactgggccgctcgaccatgggca
cgctatctgccgcccccgacggtgctgacgacggtccggccaccgggtggcgtgaccgca
gccgcgctctcgccggatggacgagtcctcgcggtcggcgatgaccagggacatgtcagg
ttcttcggcgtggacctgccggtggcacgcgcgggattgcgacggtccgccgcacacgcg
accggtccccgggcccacctggcctgggctgcggcgccctggaccgaggcggtgctcgca
gcctacggctcgcagggaccctccacgccgatacggtcgttggtgttctcaccctcgggc
cccgatgttgccgtcgtcggggaagcgggcctgagcctctggcggccgacgcagagactt
ccgctgttcgagcgtgccgcggcgatcgaaccggtcgcggtgaccttctcaccgacaggg
cggatggtggccgcaggcggctccgggattggcgtctggatgtccgagaccggcttccga
ctcgtagcgaacgcatctcccgcgttgacgaatggctcggtgtcggccctcgccttctcg
cccgatgaacggttgctggccgtcgggggccagcgccacggccagggccgagtttggctg
tgggaggtgtcctcggggcgcctcgctgcagagctcgtcagcgaatccggcccggtcgtc
gacctcgtcttcgcccccggcggtcggacactcgccgtcgctggcgccgatcacaccatt
cgctactgggatgtggcggagcgggcactggcggccaccgctgtcctgttcggcaacggc
ggccatgcagtgctgttgccgaacggccagtatctggtggccggatgggcccagggggca
ctgtggtggacggcgaagcggcgccgtttcggcccggacgagctcgacgggctcatcccg
gccgccgcaaggctcgacccggaccggccgatccccattctggccgactttcccgctctc
gcggcggacccggacccggagccgtcggttcaccgtccccgccgtcgtctgctcggccgg
cggcatccctga
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