Frankia alni: FRAAL5334
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Entry
FRAAL5334 CDS
T00384
Name
(GenBank) Putative Bacteriophytochrome (Phytochrome-like protein)
KO
K11354
two-component system, chemotaxis family, sensor kinase Cph1 [EC:
2.7.13.3
]
Organism
fal
Frankia alni
Pathway
fal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FRAAL5334
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fal01001
]
FRAAL5334
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
fal02022
]
FRAAL5334
Enzymes [BR:
fal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
FRAAL5334
Protein kinases [BR:
fal01001
]
Histidine kinases
CheA family [OT]
FRAAL5334
Two-component system [BR:
fal02022
]
CheA family
Cph1-Rcp1 (light response)
FRAAL5334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
SpoIIE
PAS_2
GAF
PAS_4
PAS_9
Motif
Other DBs
NCBI-ProteinID:
CAJ63967
RhizoBase:
FRAAL5334
UniProt:
Q0REY5
LinkDB
All DBs
Position
complement(5789913..5792264)
Genome browser
AA seq
783 aa
AA seq
DB search
MSGAGEFPEMPPPEPVDLTNCDREPIHIPGSVQPHGVLLAVRADDDLTVVQVSANIAETL
GREAAATIGRPLRELVGDAAAKAVRDVVRTAFDLRGAGPVDLVVGDGHDLRRYDALLHRV
GEQVVIELQAARSTRPLSYSGTYARTRQSVLRLSSSSSLTELYDVVVEEVRRLTGFDRVM
VYRFDAAWNGEVVAEAKLDRLNSFHGLHYPATDIPAQARALYERSWLRLIPDVDYRPVPL
VPAVNIVTGGPLDLSDAWLRSVSPIHIEYLQNMGVTASMSISLLRDGRLWGLIACHHYSG
RHEPGYEICAAAEFLGHLFSLRLVSRENEQTLESTLATREALDQILVEAQSGGALLVDVL
TSGGPNLADLIDCGGVSVAIDGEYRTFGAVPPREAQRAAFDALGTEGAILACDALPRDAP
HMAEHRDVACGILAFRLSGDEGVAWFRPETVRTVDWGGDPRNKELNAREAAGVRLSPRRS
FDRWREVVRDRARPWSAHDLAIAAELRQHLLRLVYPGARRGADLARLMQESLLPERLPPI
PGFEIEAWYDPAAAGRVGGDWYDAVPMPDGRVALIVGDVAGHGVAAAGTMAQLRNALRAY
VVDVDPADPRPARSVLDRLDRLAAALLPEAIATVAVAVTDPVTGLAQIASSGHPPPVLLS
AVGEPVVVEVEIAPPVGAAIPGLAATRPPATAGEAVDAPGGWTARVRLAPGDALALFSDG
LTERRTEAPDVGIERLRAQADGAAAAHPDLRGLGDSLFRTCRDPDNDDDATLLLLRRRPP
HQP
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcgccggcgagttcccggagatgccgccgccggagcccgtggatctgacgaac
tgcgaccgcgagcccatccacatcccgggcagcgtgcagccccacggcgtgctgctcgcc
gtccgcgcggacgacgacctcaccgtggtgcaggtctccgccaacatcgccgagaccctc
ggccgcgaggccgcggccacgatcggccggccgctgcgcgagctcgtcggcgacgcggcg
gcgaaggccgtgcgggacgtcgtgcggaccgcgttcgacctgcgtggggcaggcccggtc
gacctcgtcgtcggcgacggtcacgacctgcgccgctacgacgccctgctgcaccgggtg
ggcgagcaggtcgtcatcgagctgcaggccgcccgcagcacccggccgctgtcctattcc
ggcacctatgcgcggacccggcagtccgtgctgcggctgagcagctccagttcgctcacc
gagctctacgacgtggtggtcgaggaggtccggcggctgaccgggttcgaccgggtgatg
gtctaccggttcgacgccgcctggaacggcgaggtcgtcgcggaggcgaaactcgaccgc
ctgaacagctttcacgggctgcactatccggccacggacattccggcgcaggcccgcgcc
ctctacgaacggtcgtggctgcggctgatcccggacgtggactaccggccggttccgctc
gtcccggcggtgaacatcgtcaccggtgggccgctcgacctgagcgacgcctggctgcgc
agcgtctcgcccatccacatcgaatacctccagaacatgggcgtcaccgcgtccatgtcc
atctcgctgctgcgtgacggccggttgtgggggctcatcgcctgccatcactattccggc
cggcacgagcccggctacgagatctgcgccgccgccgagttcctcggccacctgttctcg
ctgcggctggtcagccgcgagaacgagcagaccctggagtcgacgctggcaacccgcgag
gcgctcgaccagatcctcgtcgaggcgcagagcggcggcgccctgctggtcgacgtcctg
acctcgggcgggccgaaccttgccgacctgatcgactgcggcggcgtctccgtcgcgatc
gacggcgagtaccgcacgttcggcgccgtcccgccgcgcgaggcgcagcgagcggcgttc
gacgccctgggcaccgagggcgccatcctcgcctgcgacgcgctgccccgcgatgccccc
cacatggccgaacaccgcgacgtggcctgcggcatcctcgccttccggctctccggggac
gagggtgtcgcctggttccggccggagaccgtccgcaccgtcgactggggcggcgacccg
cgcaacaaggagctcaacgcccgggaggccgccggggtgcggctcagcccgcgccggtcg
ttcgaccgctggcgcgaggtcgtccgcgaccgcgcccgtccctggtcggcccacgacctc
gcgatcgccgccgagctgcgccagcacctgctgcggctggtctacccgggggctcggcgc
ggcgccgacctcgcccggctgatgcaggagagcctgctgcccgagcgcctcccgccgatt
cccggcttcgagatcgaggcgtggtacgacccggcggcggccgggcgggtcggcggcgac
tggtacgacgccgtcccgatgcccgacgggcgggtggccctcatcgtcggcgacgtcgcc
ggccacggcgtcgccgccgccggcacgatggcgcagctgcgcaacgccctgcgtgcctac
gtcgtcgacgtcgaccccgccgacccgcggcccgcccgcagcgtcctcgaccgcctcgac
cggctcgccgccgccctgctgccggaggcgatcgccacggtcgccgtcgccgtcaccgac
ccggtgaccgggctcgcgcagatcgcctcgtccggtcacccgccgccggtgctcctgtcg
gccgtgggggagccggtcgtcgtcgaggtcgagatcgccccgccggtgggcgccgcgatc
cccggcctggcggccacgaggcctccggcgacggccggcgaggccgtcgatgctcctggc
gggtggacggcgcgggtgcgtctcgcgcccggggacgcgctggccctgttcagcgacgga
ctcaccgagcggcgcaccgaggcccccgacgtcggcatcgagcggctgcgcgcccaggcc
gacggcgcggcggccgcccacccggacctgcgcggcctgggcgactcgctgttccggacc
tgccgcgacccggacaacgacgacgacgccaccctgctcctgctccgccgccgcccgccc
caccagccctga
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