Maribacter sp. HTCC2170: FB2170_00545
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Entry
FB2170_00545 CDS
T01306
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fbc
Maribacter sp. HTCC2170
Pathway
fbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FB2170_00545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbc03019
]
FB2170_00545
03400 DNA repair and recombination proteins [BR:
fbc03400
]
FB2170_00545
Enzymes [BR:
fbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FB2170_00545
Messenger RNA biogenesis [BR:
fbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FB2170_00545
DNA repair and recombination proteins [BR:
fbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FB2170_00545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Peptidase_C36
Motif
Other DBs
NCBI-ProteinID:
EAR00109
UniProt:
A4AV87
LinkDB
All DBs
Position
complement(403401..405611)
Genome browser
AA seq
736 aa
AA seq
DB search
MVKHGMGLNEIDLHASLKKYFGFSQFKGLQEEVVKNIVQGKNTFVIMPTGGGKSLCYQLP
ALMQNGTAIIVSPLIALMKNQVDAIRGISSEYGIAHVLNSSLNKTEVKQVKEDITNGITK
LLYVAPESLTKEVYIEFLKSAGISFVAVDEAHCISEWGHDFRPEYRNLRTIVARLGDSIP
IIGLTATATPKVQEDIIKNLGITDAKVFKASFNRANLFYEVRTKTANVDSDIIRFVKQNS
GKSGIVYCLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTRSKYQDMFLMEDVDVVVATIA
FGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGK
PVAEQEIGNALLQEVVAYAETSMSRRKFMLHYFGEEFDEVNGDGAAMDDNTRNPKEKQEA
KDEVLKLLRTVEETSEKFKSKEIVKTITGQVNALVSSHKANEKSVFGIGSNQTENHWMAL
IRQVLVAGLLKKEIEQYGILHITEKGKEFLSNPTSFMMTKDHEYSKERDEAIVSASKGGV
SDVKLLKILKSLRKSQADKLSVPPFVVFQDPSLDDMALKYPITMEEMLNIYGVGEGKAKK
YGKPFVDAIVVYVEENDILRPDDLVVKSTGANSGLKLYIIQNVDRKLNLEDIASAKGLEI
PELIKEMEQIVYSGTKLNIGYYLDEVLDEDQQEEIHDYFLEAETDDLEEAMEEFDGEYEY
EDLRLYRLKFISEVAN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacatggaatggggcttaacgaaattgatttgcatgcctcgttaaaaaagtat
tttggtttttcccaattcaaggggcttcaggaagaagtcgtcaagaacattgtccagggt
aagaatacctttgtgataatgccaacaggaggtggaaaatcactctgttatcaattacct
gctttgatgcaaaatgggacggcgattatcgtatctcctttaattgctttaatgaaaaat
caggtcgatgccattcgaggaatatcttcagagtacggtattgcccatgtattgaattct
tctttgaataagactgaggtgaaacaggtaaaagaggatataacaaatgggattaccaaa
ttgttatacgttgctccggaatctttgactaaagaggtgtatattgagtttttaaagtcg
gctggaatttcttttgtggccgttgacgaagcccactgtatttctgagtggggccacgat
tttaggccagagtatagaaatttaagaactatcgttgctcgtttgggtgatagcatccca
ataattggtcttactgcaactgctactcctaaagtacaagaggatatcattaaaaatctg
ggtattactgatgctaaggtttttaaggcctcatttaatagagccaatttgttttatgag
gttcggaccaaaacagcgaatgtagattcagatattattcgcttcgtgaaacagaattct
ggtaaatctggaattgtttattgtcttagtagaaagcgcgttgaagaattggctcaggtt
ttacaagtaaatggagtaagtgctgttccttatcacgctggtttcgacgccaagacccgt
tcaaaatatcaagacatgtttttgatggaggatgtagatgtggttgttgctaccattgcc
tttggaatgggaatagataaaccagacgttcgttttgtgattcaccatgatattcccaaa
agtattgagagttactatcaagagaccggtcgtgcaggtcgtgatggtggtgaagggcat
tgtttggccttttattcttataaggatattgaaaaacttgaaaaattcatgtcgggtaaa
cctgttgcggaacaggaaattggaaatgccttacttcaagaagttgtggcctatgcagaa
acctcgatgtcaagaagaaaatttatgctccattattttggggaagaatttgatgaggtc
aatggagatggggcagctatggatgataatacccgcaacccaaaagaaaagcaagaagcg
aaggatgaagttttaaagcttttacgaactgttgaagagacaagcgaaaaattcaaatcc
aaagaaattgtaaaaacaattacaggacaggtgaatgccctggtttcttcacataaggct
aatgaaaaatctgtattcggtatcggttcaaatcagaccgagaatcattggatggcccta
attagacaagttttggttgccgggcttcttaaaaaggaaatagaacagtacggaattcta
catattacagaaaaaggaaaagagtttttatcaaatccaacttcctttatgatgaccaaa
gatcatgagtatagtaaggaaagagatgaagcaattgtgagtgcatccaaaggaggggtt
tccgatgttaaactattgaagattttgaaatctcttcgtaaatcccaagcagataaactt
agtgttcccccttttgttgtattccaggatccatcattggatgatatggcattgaaatat
cctattaccatggaggaaatgttaaatatttatggggtaggggaaggcaaggcaaaaaaa
tatggcaaaccttttgttgatgccattgtcgtctatgttgaggagaatgatattttacgc
ccggacgatttggtcgtaaaaagtactggagccaattcaggtttgaaactctatataatt
caaaatgttgatagaaaattgaacctggaggatatagcctctgccaaaggactcgagatt
ccagaactaatcaaagagatggaacaaatagtctatagcggaacaaaattgaatattggt
tattatcttgatgaggttttggatgaagaccagcaagaagaaattcatgattatttcttg
gaagccgaaacagatgatttagaagaggcaatggaagagtttgatggcgaatacgaatac
gaagatttaagactttatagattaaagtttattagtgaggtggcaaactaa
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