KEGG   Ferrimonas balearica: Fbal_1387
Entry
Fbal_1387         CDS       T01318                                 
Name
(GenBank) RNAse E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
fbl  Ferrimonas balearica
Pathway
fbl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fbl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Fbal_1387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fbl03019]
    Fbal_1387
   03009 Ribosome biogenesis [BR:fbl03009]
    Fbal_1387
Enzymes [BR:fbl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     Fbal_1387
Messenger RNA biogenesis [BR:fbl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Fbal_1387
Ribosome biogenesis [BR:fbl03009]
 Prokaryotic type
  rRNA processing factors
   Fbal_1387
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: ADN75591
UniProt: E1SMQ2
LinkDB
Position
complement(1557244..1560543)
AA seq 1099 aa
MKRMLINATQSEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRVEPSLEAAFVDY
GAERHGFLPIKEIAREYFADGAPMAGRPNIKEVIKEGQEVIVQVDKEERGTKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDERSELKDALSKLQVPQGMGLIVRTAGVGKAAEEL
ADDLRVLLHHWDAIKQAADSRPAPILIHQESNVIVRAIRDYLRSDIGEILIDHPRIFEQA
KEHISLVRPDALSKLKQYQSEVPLFTHYQIETQIESAFQREVRLPSGGSIVIDPTEALTA
VDINSARATKGGDIEETALQTNLEAADEIARQLRLRDLGGLVVIDFIDMGPVRHQREVEN
RLRDAVRQDRARVQIGRISRFGLLEMSRQRLRPSLGESAAHLCPRCNGQGTIRGTESLAL
SILRLMEEEAIKENTAQIEAQVPTDVAAFLLNEKRKAIRIIEQRHKVEVYVIPHPHMETP
NYTVVRHRKDDTISEASYSLVERPEATLYEPRKLERQQGDKPVLQGLSAPKAEAEVKAEK
PAEKAPAPAKPKRQPKAEPVAAAKPGLLARIGAAIKGLFSSEEAEQEQPKEKKSERGGQR
RQRGERGERGERQDRNRRNRKRGERSEQDEQGKGEANKERRRNRRDRRGDRNQDEPRQDR
AAKSGKDNREERRDDSRREERREESRREERRDDSRREERRERRKKEPRQDKVEKVEKVEA
EAEAKTESRREEQVEQRRERRQRRQLERSVRSQPIKRDAVEEEAQVAAPVTEVAAEQPAV
APQPAAEAPVQTAVAAEGNGERREESELTLTDNERNAHRRSRRSPRHLRAAGQRRRRQTR
DDVEQGSEGEMPEQQAQRDPVTARYPEATDMAAPAEEQLSIPLDQPEVAEAPAAETVADE
AKAEVTEAPATEAVAEEAKADATEAPAAQAVAEEAVVEEAKAEVTEAPAAQAVAEEAVVE
EVKTEVTEAPAEEVVAEEVKAEVSEAPAEEAVAEEVKAEVTEAPAEEVAAEEVKAEVTEA
PVETAAEEAAPAPVATAAPRNGLLDLSRAAQAAMATPASTAPEMPLKEVTVPQYEAKAND
FALNRYRMMVNANMTRPVE
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgaaaagaatgttgattaacgcaactcaatctgaagagttgcgtgttgctctggtagat
ggccagcgcctctatgatctggatatcgaaagtcccggtcacgagcagaaaaaagccaat
atctacaaaggcaaaatcacccgcgtagaaccctccctcgaagctgccttcgtcgactac
ggcgctgagcgtcacggcttccttcccatcaaagagattgcccgcgaatactttgctgat
ggtgcgccgatggccggtcgccccaacatcaaagaggtgatcaaagagggccaggaagtg
atcgtccaggtcgacaaagaggagcgtggtaccaagggcgcggccctgaccaccttcatc
agcctcgccggttcctacctggtactgatgccgaacaacccccgcgctggtggtatctcc
cgccgcatcgagggtgacgagcgctctgagctgaaagacgccctgtccaagctgcaggtg
ccgcaaggcatgggcctgatcgtccgtaccgcgggcgttggcaaagccgctgaagaactg
gcggacgacctgcgcgtgctgctgcaccactgggacgccatcaagcaagccgctgacagc
cgcccggcgccgatcctgatccatcaggaaagcaacgttatcgttcgcgccatccgtgat
tacctgcgcagcgacatcggcgaaatcctcatcgaccacccgcgcatcttcgaacaggcc
aaagagcacatcagcctggtgcgcccggacgccctgagcaagctcaagcagtaccagagc
gaagtgccgctgttcacccactaccagatcgaaacccagattgagtccgctttccaacgg
gaagtgcgcctgccgtctggtggttccatcgtgatcgatccgaccgaagcgctgaccgcg
gtggacatcaactccgcccgcgccaccaaaggcggcgacattgaagaaaccgcactgcag
accaacctggaagcggctgacgagatcgcccgccagctgcgcctgcgtgacctcggtggc
ctggtggtaatcgactttatcgatatgggcccggtacgccaccagcgtgaagtggaaaac
cgtctgcgtgacgccgtccgtcaggaccgcgcccgcgttcagatcggtcgtatctcccgc
ttcggtctgttggagatgtcccgtcagcgcctgcgcccgtccctgggtgagtccgctgcc
cacctgtgtccgcgctgtaacggccagggcaccatccgtggcaccgagtctctggcgctc
tccatcctccgcctgatggaagaggaagcgatcaaggagaacaccgcccagatcgaagct
caggttccgaccgatgtggccgcgttcctgctcaacgaaaagcgcaaagcgattcgcatc
atcgagcagcgccacaaggtggaggtgtacgtcattccgcacccccatatggaaaccccg
aactacaccgtggttcgccaccgcaaagacgacaccatcagcgaagccagctacagcctg
gtagagcgtccggaagcgactctgtacgaaccgcgtaagctggaacgtcagcagggcgac
aagccggtactgcagggtctgagcgccccgaaagcggaagccgaagtcaaagccgagaag
ccggccgagaaagcccctgctcctgccaagccgaagcgtcagcccaaagctgagccggtt
gccgccgccaagcccggcctgctggcccgcattggtgctgccatcaagggcctgttcagc
agcgaagaagccgagcaggaacagccgaaagagaagaagtccgagcgtggtggccaacgt
cgccaacgtggcgagcgtggcgaacgcggcgagcgtcaggaccgtaaccgtcgtaaccgc
aagcgcggcgagcgttctgagcaggacgagcaaggtaaaggcgaagccaacaaagagcgc
cgccgcaaccgtcgcgaccgtcgtggtgaccgcaaccaggatgagccgcgtcaggatcgt
gccgccaagtccggtaaggacaaccgcgaagagcgtcgtgacgactctcgtcgtgaggag
cgtcgtgaagaatcccgtcgtgaagagcgccgtgatgattcccgtcgcgaagagcgccgc
gagcgtcgtaagaaagagccgcgtcaggacaaggtagagaaagtcgaaaaggttgaggcg
gaagccgaagccaaaaccgaatctcgccgcgaagagcaggttgagcaacgccgcgagcgt
cgtcaacgccgtcagctggagcgttccgttcgcagccagccgatcaagcgtgacgccgtt
gaggaagaagcccaggttgccgccccggtaaccgaagtggctgctgagcaaccggctgtc
gccccgcaacccgctgccgaagcgccggtacagaccgccgtggcagccgaaggcaatggc
gagcgtcgcgaagagtccgaactgaccctgaccgacaatgagcgcaacgctcaccgccgc
tctcgccgcagcccgcgtcacctgcgtgccgctggccagcgtcgccgtcgccagacccgt
gacgacgttgagcagggcagcgaaggcgaaatgccggagcagcaggctcagcgtgacccg
gttacggcccgttacccggaagccactgacatggctgcaccggcggaagagcaactgagc
atcccgctggaccagcctgaggttgccgaagccccggccgcagaaaccgttgctgacgaa
gccaaagcggaagtgaccgaagccccggcgacagaagccgttgctgaagaagccaaagcg
gacgctaccgaagccccggctgcacaagcggttgctgaggaagcggttgttgaagaggcc
aaggccgaagtcaccgaagccccggctgcacaagccgttgctgaagaagcggttgttgaa
gaggtaaagaccgaagtgaccgaagccccggctgaggaagtggttgctgaagaggttaaa
gccgaagtgagcgaagccccggctgaggaagcggttgctgaagaggttaaagccgaagtg
accgaagccccggctgaggaagtggctgctgaagaggtaaaggccgaagtgactgaagct
ccggtggaaaccgccgcagaggaagccgccccggccccggtcgccaccgcagcaccgcgt
aacggtctgctggacctgagccgcgcagcccaggctgctatggcgactccggcaagcacc
gccccggagatgccgctgaaggaagtgaccgtgccgcagtacgaagccaaagccaatgac
ttcgcactgaaccgctaccgcatgatggtgaacgccaacatgactcgcccggtcgagtaa

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