Ferrimonas balearica: Fbal_3272
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Entry
Fbal_3272 CDS
T01318
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fbl
Ferrimonas balearica
Pathway
fbl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fbl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Fbal_3272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbl03021
]
Fbal_3272
Transcription machinery [BR:
fbl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Fbal_3272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
EXOC6_Sec15_N
TMPIT
Motif
Other DBs
NCBI-ProteinID:
ADN77471
UniProt:
E1SWK9
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All DBs
Position
3704413..3706245
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AA seq
610 aa
AA seq
DB search
MDQTPQSQLKLLVAKGKEQGYLTYAEVNDHLPADMVDSDQIEDIIQMINDMGIQVFESAP
DQDELMMSEDATDEDAAEAAAQALASVEGELGRTTDPVRMYMREMGTVELLTREGEILIA
KRIEDGINQVQCSIAEYPEAISFLLDQWDRFEAEEIRLAEIISGFVTEEEEAPTATHVGS
ELPKEELDDEDEDEEEDDDDSDDDTSNGPDPEQAREKFTSLREHYELVQKAFAEHGRDSL
EAAMLITRLSELFKEFRLVPKQFDVLVNNMRSMMDRVRVQERLIMKMCVEQAKMPKKNFL
KLFAGHESETAWLQAEIDAGKSYSAALGEHQEELHRCIQKLAQIQEETGLSIAKIKDINR
RMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRR
GYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEEL
AERMMMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLAQPVDSATAESLKAA
TAEVLAGLTAREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSR
SEILKSFLDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaactccgcagtcgcaacttaagctcctggttgccaagggcaaagagcaaggc
tatttgacgtacgccgaggtgaatgatcacctgccggcggatatggtcgactctgaccag
atcgaagatattatccagatgatcaacgacatgggcatccaggtctttgagtccgcaccg
gaccaagacgagctcatgatgtctgaggacgccaccgacgaagacgccgcagaagcggcg
gctcaggccctggccagcgttgaaggcgaactcggccgcaccaccgacccggttcgcatg
tacatgcgtgaaatgggcaccgtggagctgctgacccgcgaaggcgagatcctgatcgcc
aagcgcatcgaagacggtatcaaccaggtacagtgctccatcgccgagtacccggaagcg
atcagcttcctgctggatcagtgggaccgtttcgaagcagaagagattcgtctggctgag
atcatctccggcttcgtgaccgaagaggaagaagccccgaccgccacccacgtgggttcc
gagctgccgaaagaggagctggacgacgaggatgaggacgaggaagaggacgacgacgac
agcgacgacgatacctccaacggcccggatccggaacaagcccgcgagaagttcacctcc
ctgcgtgagcactacgaactggtgcagaaggcgtttgccgagcacggtcgtgactctctc
gaagcggcgatgctgatcactcgtctgtctgagctgttcaaagagttccgtctggtaccc
aagcagttcgacgtactggtcaacaacatgcgttccatgatggaccgcgttcgggtgcaa
gagcgcctgatcatgaagatgtgtgttgagcaggccaagatgccgaagaagaacttcctc
aagctcttcgctggccacgagtctgaaactgcctggctgcaagccgaaatcgatgccggt
aagtcttacagtgccgccctgggcgagcaccaggaagagctgcaccgctgcatccagaag
ctggcccagatccaggaagagaccggtctctccatcgccaagatcaaagacatcaaccgt
cgtatgtccatcggtgaagccaaggctcgccgagcgaagaaagagatggttgaagccaac
ttgcgtctggtgatctccattgccaagaagtacaccaaccgtggcctgcagttcctcgac
ctgatccaggaaggcaacatcggtctgatgaaggcggtggacaagttcgaataccgtcgt
ggctacaagttctccacttacgccacctggtggatccgtcaggccatcacccgctccatt
gcggaccaggcccgcaccatccgtattccggtgcacatgatcgagaccatcaacaagctc
aaccgcatctctcgtcagatgctgcaggagatgggccgtgagccgactccggaagagctg
gctgagcgcatgatgatgccggaagacaagatccgtaaggtgctgaagatcgccaaagag
ccgatctccatggagacgccgatcggtgacgatgaagattcccatctgggcgacttcatc
gaagataccactctggcccagccggtggattccgccaccgctgagagcctgaaggccgcc
accgctgaagtactggctggcctgaccgctcgtgaagccaaggtactgcgtatgcgcttc
ggtatcgagatgaacaccgaccacaccctggaagaggtgggcaaacagtttgacgtgacc
cgtgagcgtatccgtcagattgaagccaaggcactgcgtaagctgcgccacccgtcccgc
tctgaaatcctgaagagcttcctggacgagtaa
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