Felis catus (domestic cat): 101087313
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Entry
101087313 CDS
T02385
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
fca
Felis catus (domestic cat)
Pathway
fca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101087313 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fca03021
]
101087313 (POLR1A)
Enzymes [BR:
fca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101087313 (POLR1A)
Transcription machinery [BR:
fca03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101087313 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
101087313
NCBI-ProteinID:
XP_023107609
EnsemblRapid:
ENSFCTG00005002169
LinkDB
All DBs
Position
A3:complement(100495705..100571288)
Genome browser
AA seq
1718 aa
AA seq
DB search
MLGSKTMPWRRLQGISFGMYSADELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNSCPGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPTAFEIQEELEQYTTHIVQNNLLGSHGAH
VKNVCESRSKLIASFWKAHMSAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKADQKDT
EPLGIEDAQMGKRGYLTPTSAREHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEEKDSSIALDRSFLSTLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTTRGCFFTREQYMELLYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKISGKAWVQES
PRPVPGFKPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRHRVIEESTHCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYNNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSRHP
NTMLRNGAFLNYSQKIQAAVKALNLEGGNQNGRSPGTHQILRMWGELDEQSRRKYQKKAA
ACPDPSLSIWRPDIYFASVSETFEKKVDDYSLEWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGEKRDKFQVYQLRFQ
FLPRAHYQQEKCLRPEDILHFMETRFFKILMESIRKKNNKASAFRSVNTRRATQRDLDNT
GDSERNRGEQEGDEEEEGHIVDAEAEEGDADASDTKRKKKQEEEVDYESEEDEVGEENDD
EDMQEEGHGPGEGAEKAQEQDEEVGSGAEEDSAPAAPLTQPRKSTRVREPQGAEAVERRA
QAVRESHPFIEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAQGTVVYATKGITRC
LLNETTNKKNEKELVLNTEGINLPELFKYAEVLDLSRLYSNDIHAMANTYGIEAALRVIE
KEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLK
QATMMGSHDELRSPSACIVVGKVVRGGTGLFELKQPLR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcgaagaccatgccctggcggaggctgcagggcatttccttcgggatgtat
tcggccgacgagctcaagaaattaagcgttaagtccattacgaaccctcgttacctggac
agcctgggaaacccatcagtgaacggcctgtacgatttagctttgggccctgcggattcc
aaagaggtgtgctccacctgtgtgcaggacttcaacagctgccctggccacctgggccac
attgagcttccgcttacagtgtataaccctctcctctttgataaactctacctgctgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggccgtgattcacctctta
gtctgccagctgcgagttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctagaagaaaacgctgatcctactgcctttgaaattcaggaagag
ttagaacaatatacaacccatattgtacagaacaatctgttgggatcccatggtgcacat
gtgaaaaatgtttgtgagagcaggagcaaactcattgcttccttctggaaggcacacatg
agtgctaagcgatgtccccactgcaagactggacggtcagttgtccgaaaggagcacaac
agcaaactgaccatcacatatccagccatggtgcacaggaaagctgaccagaaggacaca
gagcccctgggaattgaagatgctcagatgggaaaacgagggtacctgacaccgaccagc
gcccgagaacatcttattgccctttggaagaatgaaggattctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccagattcaatcccagtatgttctttttggat
ttcttggtggtgcccccctcaaggtatcgccctgtcaatcggctaggggaccagatgttt
actaatggccagacggtgaacttgcaggctgtcatgaaggacatggtcctgatccgaaaa
cttctggcgttgatggcccaagaacaggagctgccatgtgaggtggcagcacctgccaag
gatgaggaaaaagactcttcgattgccctggaccgatcctttttgagtacgcttcctggc
cagtccctcacagacaaactttacaacatttggattcgtcttcagagccacgtcaatatc
gtgtttgatagtgaaatggataaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggcttattccgaaagcacatgatgggaaagcgagtggactatgcg
gcccgctctgtcatctgcccagacatgtacattaacaccaacgaaattggaattcctatg
gtgtttgccacaaaactgacctaccctcagccagtcaccccctggaatgttcaggaactg
aggcaagcagtcatcaatggccccaatgtgcacccgggagcctccatggtcatcaacgag
gatggcagtcgtacggccctgagtgctgtggacctgacacagcgggaagccgtggccaaa
cagctcctgacaccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacatcctcctgctgaaccgacagcccaccctgcacagaccctcc
atccaggcacaccacgcccgcatcctgcccgaagagaaagtcctgcggctccattatgcc
aactgcaaggcgtataatgccgactttgatggagacgagatgaatgcccacttcccccag
agtgaactgggacgggctgaggcctacgtcctggcctgtacagatcagcagtaccttgtt
cccaaggatggccagcccttggcggggttgattcaagatcacatggtttcaggtgcaaac
atgaccactcgaggttgctttttcactcgggagcaatatatggagctgctgtaccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcca
ctgtggacgggaaagcaggttgtgtcaacgctgctcataaacataatcccagaggaccac
atcccactgagcttatcgggaaaggcaaagatcagcggcaaagcctgggtgcaggagtct
cctcggcctgttcccggctttaaacctgactcaatgtgcgagtcccaggtgatcatcaga
gaaggggagctgctctgtggggtgctggacaaggcacactatgggagctccgcctatggc
ctggtccactgctgctacgagatctatggtggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggtttcaccttgggcgtggaa
gacattctggttaagccgaaggcggatgttaagagacacagagtcattgaagagtccacc
cactgcgggccacgggctgtcagggctgcattaaacctgccagaagctgcgtcatgtgac
gaggtccgagggaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacaacaatgagattaacaaggcatgc
atgccatttggcctgcacagacagttcccagagaacaacttgcagatgatggtgcaatct
ggagccaaaggttcaactgtaaacaccatgcagatctcatgcctgctgggccagattgaa
ttggaaggtcggagaccccccctgatggcatctggcaagtcactgccctgctttgagcct
tatgaattcacccccagggctggcggcttcgtcactggcagattcctaactggtatcaag
cctcctgagttcttctttcactgcatggcagggcgagagggtctggtggacaccgccgtg
aaaaccagccgctccggctatctccaaaggtgcatcatcaagcacttggaggggctggtc
gtccagtatgatctgacagtccgcgacagcgacggcagcgtggtacagttcctgtatggg
gaggacggcctggacatccccaagacacagttcctgcagcccaagcagttccccttcctc
gccagcaactatgaggtgataatgaaatcgaagcatctccatgaagttttatccagagca
gatccccaaaaagctctccgccacttcagagccatcaaaaaatggcaaagcaggcatccc
aacaccatgctgagaaatggtgccttcttgaattattcacagaagattcaggcagccgtg
aaagccttgaaccttgagggtgggaaccagaatggccgcagccctgggactcaccagata
ttgagaatgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcggct
gcttgtccagaccccagtctgtccatctggcgcccagacatctactttgcatcagtgtcg
gaaacatttgaaaaaaaggtggatgactatagtctcgaatgggcatctcaagcagagaag
agttatgagaaatcagagctttctcttgacaggctgaggaccctgctgcagctcaagtgg
cagcgctcactatgtgatccaggtgaggccgtgggcctactggctgcccagagcattggg
gagccctccacacagatgaccctgaacactttccactttgctggcagaggcgagatgaat
gtcactctgggcattccgaggttgagagagattctcatggtggccagtgccaacatcaag
acgcccatgatgagcgtgcccgtgttcaacaccaagaaagcactgaagagagtaaaaagc
ctgaagaagcagctcaccagagtgtgcttaggggaggtgttggagaaaattgatgtccag
gaatccttctgtattggagaaaaacgggacaagtttcaggtgtatcagttgcggtttcag
ttcctgccacgtgcacattaccagcaggagaagtgcctgagacctgaggacatcctgcac
ttcatggaaacgagattctttaaaattctgatggaatccatcagaaagaagaacaataaa
gcctcagctttcagaagcgtaaacactcggagagctacccagcgggatctagacaacact
ggggactcagagaggaaccggggagagcaggagggtgatgaggaagaggaggggcacatt
gtggatgctgaagccgaggagggagacgctgatgcctctgataccaagcgcaagaagaaa
caagaggaggaggtcgattatgagagcgaggaggacgaggttggggaggagaacgacgac
gaggacatgcaggaggaagggcatggccccggggaaggtgccgagaaggcccaggagcag
gatgaagaggtgggctcaggcgccgaggaggactcggcccctgccgcccccctcacacag
ccccggaaatccacccgcgtcagggagccccagggagccgaggccgtggagcgccgtgcg
caggccgtgcgcgagtcccacccgttcatagaggactaccagtacgacaccgaggagagc
ttgtggtgccaggtgacggtgaagctccctctgatgaagatcaactttgacatgagctcc
ctggtagtgtccttggcccagggcaccgtcgtctacgcgacaaagggcatcacgaggtgc
ctcctgaatgaaaccaccaataagaagaacgagaaggagcttgtcttaaacacagaagga
atcaacttgccagagctgttcaagtatgccgaggttctggacttaagccgcctctattcc
aacgacatccacgccatggccaacacgtatggcatcgaggccgcgctgcgggtgattgag
aaggaaatcaaggacgtgtttgctgtgtatggcattgaggttgatccccgccatctctcc
ctggttgccgactatatgtgcttcgagggcgtgtacaagccattgaatcgttttgggatc
cggtcaaactcctcccctctgcagcaaatgacatttgaaaccagcttccagtttctgaag
caggccaccatgatgggatcgcatgatgagctgaggtccccttcagcctgcatcgtggtt
gggaaagttgtcagaggcgggacaggcctattcgagctcaagcagcccctgagatag
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integrated database retrieval system
