Francisella cf. novicida Fx1: FNFX1_1397
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Entry
FNFX1_1397 CDS
T01937
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
fcf
Francisella cf. novicida Fx1
Pathway
fcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FNFX1_1397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_1397
Enzymes [BR:
fcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FNFX1_1397
DNA repair and recombination proteins [BR:
fcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FNFX1_1397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RloB
Motif
Other DBs
NCBI-ProteinID:
AEE87783
LinkDB
All DBs
Position
complement(1439148..1442387)
Genome browser
AA seq
1079 aa
AA seq
DB search
MALYTYPSNKLEYLVQVLSKLLDVEKKDLFTPTQLIVGSRGMQHWLSMQLAEYRNIAMNL
KYDMINAYILDICYEITNKQQYKKAYTKDILVWRVFRLLSSQNQEKNSHSHEGGNLMADG
LSSKDTRLRGYDNRDGWSSKLKEYYQDSDLKKYQLSVKIAETFSKYISYRSEWLQKWEKD
EYINPSKLENDEDWQMLIWRNLVKDIAETPYKVQLEALQKLDKQNLEKLNIPSDIYIFGV
NTISPKNLKFIFELAKYINVHILYINPCSEYWYDLHKSKISAWLDSDDYEIQPLLANLGQ
QGKEFFNQLLENEQQQELEVFEKFDKESLAFEKLADNNQTQLISLQRNLLELDCQNHAKQ
KDLSISINSCHSPLREVQILHDKLLDMIKADPNIKPRDILVMCPNIEDYSPYIDSVFSRY
PTDKKLPCSIADRTLLDSEPLAASFIELLQLPESNFEVNKILDYLAVPAIQQKFKITDEQ
LEAIRYWLKESCIHHSNNGQTFSWSWGLRRLMLGFSYSDSNYIIDDKLMTVPVIEGSEIA
ELGGLYELLELLERYSQDLLKPRSLANWQVYLLEMFDDVFDVTNDEQYIAKKIKDIIAKT
VTTAKNILLDQEIDLYTIRYCLISQLSEPIINNHFLNGKVTFCSMTPMRSVPFRVIAMLG
LNNGKFPRQESAISFDLIARLGRKKGDRTKRDDDRYLFLEAILSARDYLYISYIGRSVKT
NVEQQPSLILKELTSYLNLNYGWGKEDIKEYPLHAFSSKCYSDSYRSYDKAWLKLLQSEP
RDFYDSASLSNCANLPKNLSTSKLVKVFDDPTKAYANYALELYLEDDFEELEDSEPFDIN
SLDKHKLKQALLKTFEDEKDKDLTIKTAKLSGKLPESVLTDTEIKEEVENIQKLLDKMSL
ASYESKYFHQEILGYELEANCYIKNNQIMLSTPSSLNIGKKFELYLIALLVAYSEQRDIS
AVYYGIEKNQVEEFRLENIEYTTAKGILEHYINQAEQIVVKPQLAHLSLAEAICDSKNNT
DKKKQQAWQKVIKSSQHNFKALEDNSYFKLFYNKFPTVDDFEGEKIYEKFFEVIYESQS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcactatacacttacccatcaaataaacttgagtatcttgtacaagttctatctaag
cttttagatgttgaaaaaaaagatttatttacaccaacacagctaattgttggtagccgt
ggtatgcaacattggttaagtatgcaactagccgaatatcgcaatattgcaatgaatctc
aaatatgacatgattaatgcttatatcctcgatatttgttatgaaataaccaataaacaa
caatataaaaaagcatatacaaaagatattttagtttggagagtttttaggttgctatct
agccaaaatcaggaaaaaaacagtcattcccacgaaggtgggaatctcatggctgatgga
ttaagttcaaaagatacccgcctacgcgggtatgacaatagagatggttggagtagtaag
cttaaagagtactaccaagatagtgatctcaaaaaatatcagttgtcagttaaaatagca
gagaccttctcaaaatatatatcatatcgtagtgagtggctacaaaagtgggaaaaggac
gaatatataaatccctctaaactagagaatgatgaagattggcagatgctaatttggcgg
aatcttgtcaaagatattgctgaaacaccatataaagttcaattagaagcacttcaaaag
cttgataaacaaaacttagaaaaattaaatatacctagtgatatttatatatttggagtt
aacacaatatctccaaaaaatcttaaatttatatttgaattagctaagtatattaatgta
catattctatatattaatccatgtagtgaatattggtatgatttgcataaaagtaaaata
tcagcttggttagatagtgatgactatgaaattcaaccacttttggcaaatcttggacaa
cagggtaaagaattctttaatcagcttctagaaaatgagcaacagcaagaattagaagta
ttcgaaaagtttgataaagaatcattagcttttgagaaacttgccgataataatcaaaca
cagctaataagcctacagcgaaacttacttgaactagattgccaaaaccatgccaagcaa
aaagatttaagtattagtattaactcttgtcatagtccacttagagaagtgcagattttg
catgataagcttttggatatgatcaaagcagatccaaatatcaagcctagagatatccta
gtgatgtgcccaaatattgaagattattcaccatatattgatagtgttttctcaagatat
ccaactgataaaaaactgccatgctcaattgcagatagaacgctacttgattcagagcct
ttagctgctagttttattgagcttttgcagttgcctgagagtaattttgaggttaataaa
atacttgattatctagctgtaccggctatccaacagaagtttaagatcacagatgaacaa
ttagaggctattcgctattggttaaaagagtcatgtattcatcatagcaataatggtcag
acattctcatggagctggggactaagaagattaatgcttgggtttagctatagtgatagt
aattacatcattgatgataaattaatgacggtaccagttattgaaggaagtgagatcgct
gaacttggtggtttgtatgagttattagagctacttgaaagatattctcaagatttgctt
aaaccaagaagtcttgcaaattggcaagtttatcttttagaaatgtttgatgatgtcttt
gatgtcactaatgatgagcaatatattgctaaaaaaatcaaagatataatcgcaaaaaca
gtcactaccgctaaaaatatattgctagatcaagaaattgatttatatacaattagatat
tgtttaatttctcaattatcagagccaattattaataaccattttttaaatggtaaggtg
actttttgttcgatgacgccgatgcgtagtgtaccatttagagttatagctatgcttgga
ttaaataatggtaagttcccacgccaagaatctgcaattagctttgatctgatagcaagg
cttggtagaaaaaaaggtgatagaaccaaacgcgatgatgatagatatctgtttttagag
gctattttatctgctagagattatttgtatataagctatataggtagaagtgttaagact
aatgttgagcaacagccaagtttgatacttaaagagttgactagctatttgaatttgaac
tacggttggggaaaggaggatataaaagagtatccattgcatgcttttagttctaaatgt
tattctgacagttatagaagctatgataaagcttggttgaagttgttacagtctgagcca
agggatttttatgattcagcttcattaagtaactgtgctaatttaccaaaaaatctaagt
acttcaaaacttgttaaagtttttgatgaccctactaaggcttatgcaaattatgcttta
gagctgtatttagaagatgactttgaggagctagaagatagtgagccatttgatatcaat
agtttggataagcataagctcaaacaagctttgttaaaaacttttgaagatgaaaaagac
aaagatttaacaataaaaacagccaaactaagtggcaagcttccggagtcagtacttact
gatactgagattaaagaggaagttgagaatattcaaaagctcctagacaaaatgagttta
gcaagttatgagtcaaaatattttcatcaagagatattagggtatgagttagaagctaat
tgttatattaaaaataatcaaattatgttatctacaccatctagtttgaatataggaaaa
aaatttgaattgtacttaatagctttattagtagcatattctgaacaaagagatattagc
gcagtttattatggtatagaaaaaaatcaagtagaagaatttagattagaaaatattgaa
tatacaacagctaaaggaatattagagcattatataaatcaagctgagcaaatagtagtt
aagcctcaactagcacatttatctttagctgaagctatttgtgattctaaaaataatact
gataagaagaagcaacaggcttggcaaaaagtaataaaatcatcacaacataatttcaaa
gctctagaagataatagttatttcaagctattctataataagtttccaactgtagatgat
tttgagggtgaaaaaatttacgaaaagttctttgaggttatttatgaaagtcaatcatga
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