Francisella hispaniensis 3523: FN3523_1220
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Entry
FN3523_1220 CDS
T02078
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
fcn
Francisella hispaniensis 3523
Pathway
fcn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FN3523_1220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcn03400
]
FN3523_1220
DNA repair and recombination proteins [BR:
fcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FN3523_1220
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FN3523_1220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
Kinesin
AAA_30
SWI2_SNF2
eIF3_p135
Microtub_bd
AAA_22
DUF87
AAA_33
AAA_16
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AEE26523
UniProt:
F4BGC9
LinkDB
All DBs
Position
complement(1241709..1243715)
Genome browser
AA seq
668 aa
AA seq
DB search
MNKFNLVTKYAPAGDQPKAIKSLVEGVNNGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
IVAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGLKKAQTKLVEMQY
SRNDMDFSRGSFRVRGEVLDIFPADSEKDAIRVEFFDDEIEAISIIDSLTSKKIKSLHRA
TIFPSTHYVASKERKEIVIEEIKAELKERVKYFEKEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRAPGDPPPTLIDYLPENALVIVDESHVTLPQFGGMYKGDLSRKANL
VNYGFRLPSALDNRPLKFNEFEKLLPQTIYVSATPANYELEKSQNTVEQVIRPTGLLDPE
VFVRPVAIQVEDALSEINRAIAKEERILITTLTKKMAENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMKKAMDETLRRRQLQDEYNKKHNITPKTIIKNIDDMLDSSPE
MQKRAYKNNLRLKVDDVDVSAILGMTEAAKVIKALEKRMRAYAKELEFEKATTIRDKITE
IKQKFIKL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattcaacctagtaacaaagtatgctccagctggcgatcagccaaaggcaatt
aaatcgttagttgaaggtgttaataatggattacaacaccaggttttgttaggagttaca
ggctctggtaaaacatatactatggcaaatgtgattcaacaaacgcaaaaaccatgcttg
attgttgcacataacaaaactttggcagctcaattatattcagaatttaagcaatatttc
ccagataatgctgttgagtattttgtgtcatattatgattattatcaaccagaagcttat
gtagcagcatcagatacttatattgaaaaagactcatctgtaaatgagcatattgaacaa
atgcgtttgtcagctacaaaagcaatacttgagcgtaatgatgtaattatagtcgcaact
gtgtcagctatctatggtctaggtgatcctgagcagtatatgcaaatgcttttgcaccta
aaggtaggcgaagagctagggctaaaaaaagctcaaactaagttagtagagatgcaatat
tcgcgcaatgatatggattttagtcgtggtagttttcgagttaggggagaagtattagat
atctttccagcagactctgagaaagatgctattcgtgtagagttttttgatgatgagata
gaagcaataagcataattgattcactaacatcaaagaagattaaatcactacatcgagcg
acgatttttcctagtactcattatgtagcatctaaagaacgtaaagaaatagttattgaa
gagatcaaagcagaactgaaagaaagagttaaatattttgaaaaagagggtaaactactt
gaagctcaaaggatagagcaacgtactaagtatgatattgaaatgattcaagaacttggc
tattgtacaggaattgaaaattactcaagattgctttctggaagagctccaggtgatcca
ccaccaacattgattgactatctgccagaaaatgccttagttatagttgatgagtcgcat
gtgacactgcctcagtttggtggaatgtataaaggtgatctctcgcgtaaggctaacctt
gtaaactatggctttagacttccatcagccttggataaccgcccactaaaatttaatgag
tttgagaaattattaccacagacaatttatgtatcggctacgccagctaattatgaatta
gaaaaatctcaaaatactgtggaacaggtaattcgtccaacaggattgttagatccagag
gtttttgttcgtccggtagctatacaggttgaagatgctttatcagagataaatagagct
atagccaaagaagaaagaatcttgataacaaccttaaccaaaaaaatggcagaaaacttg
acagaatatctatctgagcatggcgttaatgtcagatatctacattctgatattgatact
gttgagagagttcaaattattcatgacttgcgtcatggtgtatttgatgtgctagtgggt
attaaccttcttagagaggggcttgatatgccagaggttggtgtactactaatatttgat
gctgataaagaaggtttcttacgttctgaaaaatctcttatccagacgattgggcgtgta
gcaagaaatcaaaatggtagagctattttgtatgcagatgttgtcacaaaatctatgaaa
aaggctatggatgaaactctacgtcgtcgtcaacttcaagatgaatataataagaaacat
aatataactcccaaaactattattaagaatattgacgatatgcttgatagctctccagag
atgcaaaaacgtgcttataaaaataatttgcgtttaaaggttgatgatgttgacgtttcg
gctatactaggtatgactgaagctgcgaaggttatcaaagctctcgaaaagcgtatgcga
gcttatgcaaaagagctagaatttgaaaaagctacaactattagagataagataactgaa
ataaagcagaagtttattaagttgtaa
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