Fragilariopsis cylindrus: FRACYDRAFT_138278
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Entry
FRACYDRAFT_138278 CDS
T04784
Name
(GenBank) DNA_pol_E_B-domain-containing protein
KO
K02328
DNA polymerase delta subunit 2
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03030
DNA replication
fcy03410
Base excision repair
fcy03420
Nucleotide excision repair
fcy03430
Mismatch repair
fcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRACYDRAFT_138278
03410 Base excision repair
FRACYDRAFT_138278
03420 Nucleotide excision repair
FRACYDRAFT_138278
03430 Mismatch repair
FRACYDRAFT_138278
03440 Homologous recombination
FRACYDRAFT_138278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcy03032
]
FRACYDRAFT_138278
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_138278
DNA replication proteins [BR:
fcy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
FRACYDRAFT_138278
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
FRACYDRAFT_138278
MMR (mismatch excision repair)
DNA polymerase delta complex
FRACYDRAFT_138278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-ProteinID:
OEU21119
JGI:
138278
UniProt:
A0A1E7FSH9
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
PYQRQYSHVYSYRLSALKDKCWNQLKKLPNNIEGNGKVTDMNTTSSKNVDRILELQENRL
SNVVGTLIVERLNSNSDDNYYQDGAAGEDRQLHPESICRSGDQLFLEDESGRVAIRFHSS
PSYVYQYCTGTVVGVRGLVDEKGMMHVQYIVNPALVAPPAVCCENGNDNKNALSGSEPSN
LAPHLLLVSSLLCGDPDVSSLPREMLVSYLQGHFDPDSAARVARIVVAGSGPGAVEPTMG
LRELDLWGLQVTRTASIPLDILPSATDPTSRNWPQRPFHSSLLPHTLRDTTGSAASMAHM
TPNPYEAMHGNQLVLGTDGLNVRDLQKHILKPQALPSDDDNDGQKKEDDEDDNNNSTSSS
PQLLTELEALEQTLRWSHICPTGPSSSSLGMVPSGDPMVLNRATPNIYFCGNCEEGFATK
LLTYDDDDADTTGSDGDDASEIEKPKTRLVCIPKFSETGEAVLVNLQTLDVEVLRFKTNE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ccataccaacgtcagtattctcatgtttattcctaccgtttatcggctttgaaggataaa
tgttggaatcaattgaagaaattaccgaacaacatagaggggaacgggaaagtcaccgat
atgaatactacgagtagtaagaacgttgatcgtattttggaattacaagaaaatcgtctt
agtaatgttgttgggacgttgatcgtggaaagattaaacagtaatagtgatgataactat
tatcaagatggagcagcgggagaagatcgacagctacacccggaatcgatctgtcgttct
ggtgatcaactctttttagaagatgaatcaggtcgtgtcgcaatccgttttcacagtagt
ccaagttatgtatatcaatattgtactggtactgttgtgggagtacgaggtttagttgat
gagaagggaatgatgcatgttcagtacattgtgaatcctgctttggtggctcctccagct
gtgtgttgcgaaaatggcaacgacaacaaaaacgctttatcaggatccgaaccaagtaac
ttagcaccacatttgttgttagtttcttccttgctttgcggtgatcctgatgttagttca
ttgccacgagaaatgcttgtttcgtacctacagggacatttcgatccagacagcgctgcc
agggtcgctcggatcgtcgttgctggatctggaccgggtgcagtcgaaccgacaatggga
ctacgagaattagatctatggggacttcaggtgacacgtactgccagtatccccttggat
atattaccatcggcgaccgatccaacctcacggaactggcctcaacggccgttccattct
agtttattacctcacactctacgtgatacaactggtagtgctgcatcgatggctcatatg
acgcctaatccatacgaagcgatgcatgggaatcaacttgttctaggtacagacggttta
aatgtacgggatttgcagaaacatattctcaaaccacaggcactaccatccgacgatgat
aatgacggacagaagaaagaagacgatgaggacgacaacaacaactcaacatcgtcgtca
ccacaactcttaaccgaattagaagctttggaacagacattgcgatggtctcatatatgt
ccaacaggtccaagtagttctagtttggggatggtaccatcgggtgatccaatggtattg
aaccgagcaactccgaatatatatttctgtggaaattgcgaagaaggctttgcaacgaaa
ctactcacttacgacgatgacgatgcggatacaacgggaagtgatggcgatgatgcttcc
gaaattgaaaaaccgaaaacacgattggtttgtattccgaagtttagtgaaacgggagaa
gctgtattggtcaatttacaaactttagacgttgaggtattgagattcaaaacaaacgaa
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