Fimbriimonas ginsengisoli: OP10G_1634
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Entry
OP10G_1634 CDS
T03038
Name
(GenBank) DNA ligase D
Organism
fgi
Fimbriimonas ginsengisoli
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
AIE85002
UniProt:
A0A068NNM3
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Position
1766082..1768688
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AA seq
868 aa
AA seq
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MKRTYADKRNFAVTPEPTFATQVDDKGGPLTFVIQRHEASHLHFDFRLECDGALKSWAVP
KGPSLDPTVKRAAIMVEDHPLDYADFEGRIPKGQYGGGEVILWDEGTYEPEGATGDRRRD
EELVKRGLSEGKLSFTLYGSRLQGAFTLIRKGESENWLLIKRRDEFASTEDPTKIVSSVR
TGRTAEDLRAGKRGQQMVRIPGAILAPIPPRLGVMVPKELPKPFTSELWTFEPKLDGIRA
LAIKDGPQVRIISRNGNEVSSRFPGVVSDLRALPHASFVLDGELVLLDQNGRPSFQSLME
AYHRGQAPADALHYYAFDLIYLDGYDLRRVSLSDRRAQLERVPLTRSLRLLETVDTDGEM
LYDEAMRLGFEGIVGKRLDSKYREGAPSDDWVKIKGYHTEEFLICGFTMGFGSREHTFGA
LLLGRRDESGKLRFCGSVGGGLSEAQLIELKRLLEPLKVKNSPFDEPISTRGVPTFVRPE
LLAEVRFMSWTKDRRLRFPIFKRLRPDLQLGTAEPAPKPELATTGASESDAVLEALLEPG
EELQLTIDGNPIRFTSLSKELWPGITKRDFVRYLASVSDIYLAHLRDRPVTFVRYPDGIG
GEGFFQRHWEHRLPEFVETAKIFSQNNGKALDFVLCNNLASLLWFGQVAAIELHPWHSRV
TTSPDAVGLGAQFDTLENLEESVLEYPDYLVCDLDPNIRSGLEKEGAEPELNEAGWRRTV
EVAFGLKEMLDSLRLKSFVKTTGKTGLHVYLPLERHYDSTQVREVARTLGQHLMERMPGK
ITMEIRLNKRPNLVFFDANMNGRGKTLASAYSPRPVPGGRVSMPIAWEMLDQVHPDEFNI
FTVPKLLATNGDEWHGILNARQLLAVGP
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggacctacgccgacaagcggaatttcgccgtcacccccgaaccgaccttcgcg
acgcaagtcgacgataagggagggccgctgacgttcgtgattcaacgtcatgaggcatcg
cacctccatttcgactttcgactcgagtgcgatggcgcgctcaagagctgggcggttcca
aagggtccctcgctcgacccgactgtcaaacgggcagcgattatggtggaggaccatccg
cttgactatgccgacttcgaaggtcggatccccaaagggcaatacggaggcggagaggta
atcctctgggacgaggggacctacgaaccggagggagcgaccggcgaccggaggcgggac
gaagagctcgtgaagcgggggctttctgagggcaagctctcattcactctctacggatcc
cgccttcaaggcgccttcaccctgatccgaaaaggggaatcggaaaactggctgctgatc
aagagaagggacgagttcgcgagcacggaagacccgaccaagatcgtctcctccgtacgc
acgggccgaacggcggaagatcttcgagcaggcaaacgcggccaacagatggtccgaatc
cccggcgcgatcctcgccccgatcccgcctcggttgggggtcatggttcccaaagagctg
cccaagccgtttaccagcgagctttggacgtttgagccaaagctcgacgggatccgggcg
ctcgccatcaaagacggcccgcaggtccgcattatcagccgaaacggaaacgaggtgtcc
tcccgcttccccggcgtggtgtcggacctgcgggccttgcctcatgcctcctttgtgctg
gacggcgagttggtgctgttggatcagaacgggcggccgtcgttccagtcgctcatggag
gcgtaccaccgagggcaagcaccagccgacgcgcttcactattacgctttcgatttgatc
tacctcgatggatacgatttacggcgggtctctctctccgaccgtagggcgcaactggag
cgggttcccttgacccgttccctgcgcctgctggagaccgtggataccgacggtgagatg
ctgtacgacgaggcgatgcgcctcgggttcgaggggatcgtcggcaagcggctcgacagc
aagtaccgcgagggcgccccgagcgacgactgggtgaagatcaagggataccacaccgag
gaattcctgatctgtggcttcaccatgggattcggatcccgcgagcacactttcggggcg
cttctgctcggccgccgcgacgagagtggaaagttacggttctgcggcagcgtcgggggt
ggactgtcggaggcgcagctcatcgagcttaagcgattgctagaaccgctgaaggtgaag
aattcgccgttcgacgagccgatttcgactcggggcgtcccaaccttcgttcgccctgag
ctgctggccgaggtccggttcatgtcctggaccaaggatcgacgccttcgcttcccaatc
tttaagcggcttcgccccgatttacagcttggaactgccgagccggcacccaagccggag
ctggcgaccaccggagcgagcgaatcggatgccgttctcgaagcgctgctcgagcccggg
gaagagctgcaactgaccatcgacgggaacccgatccggttcaccagtctaagtaaggag
ctatggccgggcattaccaagcgtgatttcgtgcgctacctggccagcgtctccgatatc
tacttggcccacctgcgcgaccgtccggtcacgttcgtccgatatccggacggcatcggc
ggagaaggctttttccagcgccattgggagcaccgcctgccggagttcgtggagacggca
aagattttctcgcagaacaacggaaaagcgctcgacttcgtgctgtgcaacaacctagcc
tcgttactgtggttcgggcaggtcgccgccatcgagcttcatccgtggcactctcgggtt
acgacatctcccgatgcggtgggattgggcgcgcagttcgacaccctggaaaacctggag
gagtcagtcctcgaatatcccgactacctggtctgcgacctcgaccctaacatccgttcc
ggcctggagaaggaaggggccgagcctgagctgaacgaggcaggctggcggcgcaccgtc
gaagtggcgttcggcctcaaggagatgctcgactcgcttcgcctcaagtcgttcgtgaag
acgacaggcaagaccggactccacgtctacctcccgctggagcgccattacgactccact
caagtccgcgaagtggcccggactctggggcaacacctcatggaacggatgccgggaaag
atcacgatggagattcggctgaacaagcgtccgaatctggtcttcttcgacgccaacatg
aacggccgaggaaagactctagcctccgcctattcccctcgcccggttccaggcggacgc
gtctcgatgccgattgcctgggaaatgctggaccaagtccacccggacgagttcaacatc
ttcacggttccgaagctattggccaccaatggcgacgagtggcacgggatattgaatgct
aggcagctcttggcggtcgggccgtag
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