Candidatus Filomicrobium marinum W: BN1229_v1_2213
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Entry
BN1229_v1_2213 CDS
T03856
Symbol
trpS
Name
(GenBank) Tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BN1229_v1_2213 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fil01007
]
BN1229_v1_2213 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fil03016
]
BN1229_v1_2213 (trpS)
Enzymes [BR:
fil01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
BN1229_v1_2213 (trpS)
Amino acid related enzymes [BR:
fil01007
]
Aminoacyl-tRNA synthetase
Class I (G)
BN1229_v1_2213 (trpS)
Transfer RNA biogenesis [BR:
fil03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BN1229_v1_2213 (trpS)
Prokaryotic type
BN1229_v1_2213 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
CFX27279
UniProt:
A0A0D6JFI4
LinkDB
All DBs
Position
1:2144150..2145187
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AA seq
345 aa
AA seq
DB search
MPFEERVFSGMQPTGSLHLGNYLGAMLQWIELQKTHQCIYCVVDMHAITVWQEPAELRQA
IRKVTAAYMAAGLDPKTSILFNQSQVAAHAELAWVFNCIARLGWLNRMTQFKEKAGKDRE
NASVGLFAYPNLMAADILVYKATHVPVGDDQKQHLELARDIAGKFNNDYNTEIRARGFDD
GEFFPLPEPVITGPATRVMSLRDGTKKMSKSDPSDLSRINLTDDADTIAKKVRKAKTDPE
PLPSEAAGLQGRPEAENLIGIFAALSGSSKDTVLAEYGGRQFSEFKANLAELSVAKLGPL
GAEINRLTSDPAEIDKILADGAARAAAIAAPIMGDVKDIVGFIRS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgaagagcgcgtcttctccgggatgcagccgacgggcagtttgcacctcggc
aactatcttggagccatgctgcagtggatcgagctgcaaaaaacccatcagtgcatctat
tgcgtcgtcgacatgcacgccatcacagtgtggcaggagccggcggagctgcgccaggcc
atccgtaaggtgacggccgcatatatggctgccgggctcgatccgaaaacgagcattttg
ttcaaccagagccaggtcgcagcccatgcggagctggcatgggtattcaattgtattgcc
cgcctgggttggctcaaccgcatgacccagttcaaggagaaggcgggcaaggaccgcgag
aacgcttctgtgggtctgttcgcctatcccaacctgatggccgccgacatcctcgtgtac
aaggcgacgcatgttccggtcggcgacgaccagaagcagcatctagaactggcgcgtgat
atcgccggtaaattcaacaatgactacaacaccgagatccgcgctcgtggatttgatgat
ggcgagtttttcccgttgcctgagcccgtaatcaccggaccagccacgcgcgtgatgagc
ctgcgtgatggcaccaagaagatgtcgaaatccgacccatcggatttgtcacgcataaac
ctgacggacgatgcggacaccatcgccaagaaggtgagaaaggcgaagacagatcctgag
ccgctcccttctgaagctgcgggtttgcagggtcgccctgaggcagaaaacctgatcggt
attttcgcagcgttatctggttcgagtaaggatacggtgttggcggagtatggtggccgt
cagttttctgaattcaaggcaaacttagccgagctaagcgttgcaaagctcggtccgctt
ggagcggagataaaccggcttacgagcgatccggcagagatcgacaaaatattggctgac
ggcgctgcacgcgccgcggctatcgccgcaccgattatgggcgacgtgaaggacattgtg
ggctttattcgctcttag
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