Candidatus Filomicrobium marinum W: BN1229_v1_3726
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Entry
BN1229_v1_3726 CDS
T03856
Symbol
mscS
Name
(GenBank) Small-conductance mechanosensitive channel
KO
K03442
small conductance mechanosensitive channel
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fil02000
]
BN1229_v1_3726 (mscS)
Transporters [BR:
fil02000
]
Other transporters
Pores ion channels [TC:
1
]
BN1229_v1_3726 (mscS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
CFX57502
UniProt:
A0A0D6JKV0
LinkDB
All DBs
Position
1:complement(3638657..3639520)
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AA seq
287 aa
AA seq
DB search
MPPQDTLAEATTFLEALIAWAAQALPNLLAALALMLFGLWFAGWAARTVGRIADRERRFD
PTLKGVLTSLVRYTIVVIFFIAVLGQLGIQTTSILAALGAAGLAIGLALQGTLSNIAAGM
MLLWLRPFRTGDYIDAGDVAGTVKEVGLFASELHSWDGVYQFVPNSQLWNKQLINYSRLP
TRMVQVKYGIAYDDDIETGKATLLALAEADARIHADPAPIVFVSTLGDSAVELSLRAWVQ
NTDYWPTVRALNEEGKRALENAGLSIPFPQRDIHIYNSAPPENPPSA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccaagatacactcgccgaagcgacaacctttctcgaagccctgattgcctgg
gccgcccaggctttgccaaatctgctcgccgctctcgcgttgatgctgttcggcctctgg
ttcgcaggatgggctgcacgcaccgtcgggcgcatcgccgaccgcgagcgtcgcttcgac
ccaacgctcaaaggcgtgctcacctcgctcgtgcgctacaccatcgtcgtcatcttcttc
atcgccgtgctcggccaactcggcatccagacaacgagcatcctcgccgccctcggtgct
gcgggcctggccatcggcctcgccctccaaggcacgttatcgaatatcgccgcaggcatg
atgctgctttggctgcgccccttccgcaccggcgactacattgacgccggcgatgtcgcc
ggcaccgtcaaggaagtcggcctgttcgcgtccgaacttcattcctgggatggcgtctat
cagttcgtccccaattctcagctatggaataagcagctcatcaactatagccgcctgccg
acacgcatggtccaggtgaagtatggcatcgcctatgacgacgacattgaaaccggaaag
gcgacgttgttggcgctggcggaagctgatgcccgcatccacgctgaccccgctccgatc
gtcttcgtctccacgctcggcgacagcgctgttgaactctcactgcgggcgtgggtccaa
aatacggactactggcccaccgttcgcgcgctgaacgaggaaggcaagcgcgccctcgaa
aatgcaggcctcagcatcccattcccgcaacgggatatccacatttacaacagtgcaccg
ccagagaacccaccttccgcttaa
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