Flavobacterium indicum: KQS_01560
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Entry
KQS_01560 CDS
T01781
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fin
Flavobacterium indicum
Pathway
fin03030
DNA replication
fin03410
Base excision repair
fin03420
Nucleotide excision repair
fin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQS_01560 (polA)
03410 Base excision repair
KQS_01560 (polA)
03420 Nucleotide excision repair
KQS_01560 (polA)
03440 Homologous recombination
KQS_01560 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fin03032
]
KQS_01560 (polA)
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_01560 (polA)
Enzymes [BR:
fin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQS_01560 (polA)
DNA replication proteins [BR:
fin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KQS_01560 (polA)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KQS_01560 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQS_01560 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
HHH_5
HHH
RecR_HhH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CCG52305
UniProt:
H8XP38
LinkDB
All DBs
Position
complement(365701..368547)
Genome browser
AA seq
948 aa
AA seq
DB search
MSQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLMDVIRREKPDHLAVA
FDKGGSDYRLEMFTEYKANRDETPEAIKIAVPYIQELLRAMHIPIIEEAGYEADDLIGTL
AKQAEKQGYKVFMVTPDKDFGQLVSENIFMYRPARMGNDIEIWGVDEVKAKFEVEHPLQV
IDFLGMMGDAVDNIPGLPGVGEKTAKKLLAEFGSMENLLENTDKLKGALKEKIEANKEKG
ILSKKLATILLDCPVTFNETDYELSKPDVEKTDAIFQELEFRQMKAQFDKLFGSGKEYDE
IDTNGTDTNLITKKAPIKKAPENQMDLFGFSDDESDEPKGHSFYATLETTNHFYQIVQGE
IPTRLLIQNLMTQKSVCFDTETTGIDALNAELVGMSFSWEKGKAFYVPFPENQEEAQQLA
NKFKPFFENEAIEKIGQNMKYDLKVLRNYGLEVKGSLFDTMIAHYLINPDMRHNMDVLAE
TYLKYSPKSIETLIGKKGKGQKSMRDVALEDIKEYAAEDADITLQLKENFQPILEKVGTK
KLFDEIEIPLVQVLADMEAEGIRLDVDFLKEMSKEMAIEIQLLEQKIYETAGETFNLASP
KQLGDILFDKLKIGGAKQKKTKTGQYATGEEILSYLANDHEIVRNILEWRQMVKLQSTYI
DALPNQVDAKTQRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFIARDENYT
LVSADYSQIELRIIAALSGEENMIKAFQNHEDIHKSTAAKVFNVPLEEVTKEQRSHAKTV
NFGIIYGVSAFGLSNQTNLSRKESAELIEAYYQNYPKLKSFMSHQVDFAREHGYVETISG
RRRYLKDINSANAIVRGGAERNAVNAPIQGSAADIIKIAMINIHKRLKQENWQSKMLLQV
HDELVFDVHNSELEKIQPMIKHEMENAFIMAVPLEVEIGLGKDWLAAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaacgattatttttacttgacgcctacgctctaatttttagaggatattac
gcatttattaaaaacccaagaatcaattctaaaggaatggacacttctgctattatgggg
tttatgaactctttaatggatgttatcagaagagaaaaacccgatcatttagctgtggca
tttgacaaaggcggaagtgattatcgattagaaatgtttacggaatacaaagctaatcgc
gatgaaacgccagaagctattaaaattgccgttccttacattcaagaattattacgcgcc
atgcatattccaattattgaagaagcaggttatgaggcagatgatttaattggaacttta
gctaaacaagctgaaaaacaaggttacaaagtattcatggttacgcctgataaagatttt
ggtcaattagtctccgaaaatatttttatgtaccgcccagctcgaatgggcaatgatatt
gaaatttggggtgttgatgaagtaaaagctaaatttgaagtagaacatccattacaagta
attgattttcttggcatgatgggagatgcggtagataatattccaggactaccaggtgtg
ggtgaaaaaacagccaaaaaactattggccgaatttggttccatggaaaatcttttagaa
aacactgataaattgaaaggtgcactaaaagaaaaaatagaagccaataaggaaaaagga
attctttccaaaaaattagccacaatactattagattgcccggtgacttttaatgaaacc
gattacgaattatctaaacctgatgtagaaaaaacagatgctattttccaagaattagaa
tttcgtcaaatgaaagcacaatttgacaaactttttggctcaggaaaagaatatgatgaa
atagatacaaatggaacggatacaaaccttataactaaaaaagcacccattaaaaaagcg
cctgaaaatcaaatggatttgtttggtttttcagacgatgaaagtgacgaacccaaagga
cattctttctatgctactttagaaactacaaatcatttttatcaaatagtacaaggggaa
ataccaactcgattgttaattcaaaatttaatgactcaaaaatcagtttgttttgacaca
gaaactactggaattgacgctttaaatgctgaattagtaggtatgtcattctcctgggaa
aaaggaaaagctttttatgtcccttttccagaaaatcaagaagaagcacaacaactagcc
aataaatttaaaccgtttttcgaaaatgaagccattgaaaaaattggccaaaacatgaaa
tacgatttaaaagtattacgcaactacggtcttgaagtgaaaggatcgttgtttgacacc
atgattgcccactatttaatcaacccagacatgcgccataatatggatgtattggctgaa
acctatttgaaatacagtccaaaatctattgaaaccttgataggcaaaaaagggaaaggg
caaaaatcgatgcgtgacgtggctttagaagatataaaagaatatgcagctgaagacgca
gacattaccctgcaattaaaagaaaatttccagcctattttagaaaaagtgggtactaaa
aaattgttcgatgaaattgaaatccctttagttcaagttttagccgatatggaagccgaa
ggcattcgattagatgttgattttttaaaagaaatgtcaaaagaaatggctattgaaatc
caattattggaacaaaaaatatatgaaactgcgggtgaaacattcaatttagcttctcca
aaacaattaggcgatattttatttgataaattaaaaattggcggtgccaaacaaaagaaa
acgaaaacgggacagtatgcaaccggagaagaaatattaagttacttagctaatgaccat
gaaattgtccgtaatattttagaatggcgccaaatggtaaaattacaaagcacttatatt
gatgctttacccaaccaagtagatgctaaaacccaacgtgtgcacactgattacatgcaa
actgtagcagcaacggggcgtttaagttcaaataatcctaatttacaaaatatcccaatt
cgaactgaaagaggaagacaaattagaaaagcttttattgcacgtgacgaaaattacact
ttagtttcagctgattactctcaaatagaattgcgaattattgctgcactttctggtgaa
gagaacatgattaaagccttccaaaatcacgaagatattcataaaagtaccgctgcaaag
gttttcaacgtaccattagaagaagtaacgaaagaacaacgtagtcatgctaaaactgta
aacttcggaattatttatggtgtttctgcatttggattaagtaaccaaacgaatttatct
agaaaagaaagtgctgaattaattgaagcgtactatcaaaattatcctaagttaaaatca
ttcatgagccatcaagttgattttgctagagaacatggatacgtagaaaccatttcggga
agaagacgttatttgaaagacattaattctgccaatgcaattgtacgtggtggtgcggaa
cgtaatgccgtaaatgcacctatacaaggtagcgcagcagatataatcaaaatagcgatg
attaacatccacaaacgattaaaacaagaaaactggcaatctaaaatgttattacaagta
catgatgaattggtttttgatgtacacaacagcgaattagaaaaaatccaacctatgatt
aaacacgaaatggaaaacgcatttataatggcggttcccttggaagtagagattggctta
ggtaaagattggttagcagcacattaa
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integrated database retrieval system
