Flavobacterium johnsoniae UW101: Fjoh_4091
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Entry
Fjoh_4091 CDS
T00508
Name
(GenBank) Candidate pectin or pectate lyase; Polysaccharide lyase family 1
Organism
fjo
Flavobacterium johnsoniae UW101
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
ABQ07099
UniProt:
A5FCG6
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Position
complement(4900947..4902653)
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AA seq
568 aa
AA seq
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MQKIFPNHTLKRTFMALSFCSLVSSAYAQYPVIPKPVQEKADAILADEEKRLSEIWNANV
QIIKEEAKQGKPYLPWASYPKDFVQADIPAFPGAEGGGAYTQGGRGGKIFVVTSLEDSGK
GTFREACEAVGARTIVFNVSGIIHLKSRISMRAPYVTIAGQTAPGDGICIAGETLEIDTH
DVIIRHMRFRRGATEVTRRDDALGGNVIGNTIIDHCSVSWGLDENISLYRHQFAPNAKSK
LEKLPACNITIQNTISAEGLDTYNHAFGSTIGGLNSTFMRNLWADNISRNASIGMYGDFN
FVNNVVFNWWNRTLDGGDYRSMLNIINNYFKPGPITPQNEPISYRIVKPESGYIEPKQYG
RAYVSGNFIVGSPEVTADNWNGGVQLENLPEAETKEFLAAIKQPKPFSMPKFNIMSAEEA
YDFVLTNVGATIPKRDAVDERIIKQVKTGKIEVKDGLENSIGKEYIKRRLPADSYKKGII
THPDQVGGYPTYKGKAYKDSDNDGIPDAWEKKYGLNPNDASDANKDANGDGYTNIEKYFN
GIDPNSKVDWTKTENNTDTLAKLKSLLQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatttttccaaaccatactttaaaaagaacatttatggcgttgtcattttgt
tctcttgtttcatcggcatatgcccaatatcctgtaattccaaaacctgttcaggaaaaa
gcagatgctattttggctgatgaagaaaaaaggctgagcgaaatttggaatgctaatgtt
cagattatcaaagaagaagcaaaacaaggaaaaccttatttaccttgggcttcgtatcca
aaagattttgttcaagcagatattcctgcttttccaggtgctgaaggaggcggagcctac
acgcaaggtggacgtggagggaaaatattcgtagtgacgagtttagaagatagtggaaaa
ggaacttttcgcgaagcttgtgaagctgttggagcaagaacaatcgtttttaatgtttcg
ggaattatccatttaaaaagcagaatcagcatgcgtgcaccttacgtgacaattgctgga
caaactgctccaggcgacggaatttgtattgcaggagaaactttagaaattgatacacac
gatgttataatcagacacatgcgttttagacgtggtgcaacagaagttacaagaagagat
gatgcgctgggaggaaatgtaatcggaaatactataattgaccactgttctgtaagttgg
ggattagatgaaaatatttctttatacagacatcaatttgcaccaaacgctaagtcgaaa
ttagagaaattgcctgcttgtaatatcacgattcagaacactatttcagcagaaggttta
gatacgtataatcacgctttcggaagtacaatcggcggattaaatagtacttttatgcgc
aacttatgggcagacaacatttctagaaatgcttctatcggaatgtatggcgactttaat
tttgtgaataacgtagtattcaattggtggaatcgtacacttgacggaggtgattatcgt
tcgatgttaaatatcatcaacaattatttcaaaccaggaccaataacgcctcaaaacgag
cctatttcgtatcgaattgtaaaaccagaatctggttatattgaaccaaagcaatacgga
agagcttacgtttcaggaaactttattgtaggttctcctgaagtaacggcagacaactgg
aatggaggagtacaattggaaaaccttccagaagcggaaacaaaagaatttttagcagca
attaaacagccaaaacctttttcaatgccaaaattcaatatcatgtcggcagaagaagct
tatgattttgttttgacgaatgttggagcaacaattccgaaaagagatgctgttgacgaa
agaattatcaagcaggttaaaactggaaaaattgaagttaaagacggtttagaaaattca
attggaaaagaatatatcaaaagaagattaccagccgattcatataaaaaaggaattata
acgcatccagaccaagttggcggatatccaacttacaaaggaaaagcatataaagactca
gataatgacggaattccagatgcttgggagaaaaaatatggcttaaatccaaatgatgct
tcagatgctaataaagatgcaaacggagacggttataccaacatcgagaaatattttaac
ggaatcgatccaaacagtaaagttgattggacgaaaacggaaaataatacggatacttta
gcgaaattaaagtctttattacaataa
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