Finegoldia magna: FMG_0752
Help
Entry
FMG_0752 CDS
T00661
Name
(GenBank) HD superfamily hydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fma
Finegoldia magna
Pathway
fma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FMG_0752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fma03019
]
FMG_0752
Messenger RNA biogenesis [BR:
fma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FMG_0752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
DUF3149
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAG08170
UniProt:
B0S1D0
LinkDB
All DBs
Position
complement(817498..819039)
Genome browser
AA seq
513 aa
AA seq
DB search
MSTTTSLIIAILAGILGIVIGFFFRKSLAEKKIRSAEDYAVKIIEDANKDAETKKKELLV
EAKDEIFKMKSDLDRENKSRLKEISRQEDRLNSKEENLERKNASLEKKHKKLDSELKKAD
DMQLKIQSLIDEKELELEKVAGLTSDEAKNIVLERVKTETIREQAAIIKEIESKTKEESE
KFAREIISTSIQRYAADQVAESTVSVVNLPNDDMKGRIIGREGRNIRAFETLTGVDLIID
DTPEAVVLSAFDPVRREIARIALEKLIVDGRIHPTRIEEMVEKARKDVDNTIREKGEEAC
DETNVHGLHPELIKILGKLHYRTSYGQNVLKHSIEVSNIAGMLASELGVNVKLAKRGGLL
HDLGKAIDHEIEGPHVELGVNAAKRFKEPKDVINCIEAHHGDVEPTCIESILVQSADAIS
AARPGARRESMENYIQRLENLEQIANSFDGIESSYAIQAGREIRIMVKPDVIDESSMVIL
AKDVAHKIESELEYPGQIKVNVIRENRVSDYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacaacgtctttaataattgctattcttgctggaattttaggtattgtaata
ggtttcttttttagaaaaagcttagctgagaaaaaaatcagaagcgctgaggattatgct
gttaaaataattgaagatgcaaacaaagatgctgaaactaaaaagaaagaattattagta
gaagcaaaagatgaaatctttaagatgaaaagtgatttggatcgtgaaaataaatctcga
ttaaaagaaatcagtcgtcaagaagatagacttaattctaaagaagagaatttagaaaga
aaaaatgcatcattagaaaagaaacataaaaagctagattctgaattgaagaaagctgac
gatatgcaacttaaaatccaatctttgatagatgaaaaagaattagaattggaaaaagtt
gctggattaacaagtgacgaagctaaaaacatcgttcttgaaagagttaaaactgaaaca
atacgtgagcaagctgctattattaaagaaatcgaatccaaaactaaggaagaatctgaa
aaatttgcaagagaaatcattagtacatcaattcaaaggtatgctgcagatcaagttgca
gaatctaccgtatcagtcgttaatttacctaatgacgacatgaaaggcagaataattggt
cgtgaaggaagaaacataagagcttttgaaactttaacaggcgtagatttgattattgat
gatactccagaagctgttgtattatcagcttttgatcctgtaagacgtgaaatcgcaaga
attgctttggaaaaacttatagttgatggaagaatccatcctactagaattgaagaaatg
gttgaaaaagccagaaaagatgtagataatactataagagaaaaaggtgaagaagcttgt
gatgaaacaaatgtacacggtttacatccagaattgattaaaattctcggtaaactacat
tacagaacaagttatggtcaaaatgttcttaaacattctattgaagtttccaatatcgct
ggaatgcttgcaagtgaattaggagtaaatgtgaaattagctaaaagaggtggactacta
cacgatttaggaaaagcaattgaccacgaaatcgagggacctcacgttgaactaggcgtt
aacgctgctaaaagatttaaagagccaaaagatgttatcaattgtattgaagctcatcac
ggtgatgttgaaccaacatgtattgaatctatattagtacaatctgctgatgcaatatcc
gcagcaagacctggagctagacgtgaatctatggaaaactatatccaaagattagaaaat
ctagagcaaatagctaattcatttgatggtattgaaagttcttatgctatacaagctggt
agagaaattagaatcatggtaaaacctgatgttattgatgaaagctctatggttatatta
gcaaaagatgtagctcataaaattgaaagtgaattagaatatcctggacaaattaaagta
aatgtcataagagaaaatagggtatctgattacgcaaaataa
DBGET
integrated database retrieval system
