Fomitiporia mediterranea: FOMMEDRAFT_158819
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Entry
FOMMEDRAFT_158819 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_158819
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FOMMEDRAFT_158819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TarH
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
18675010
NCBI-ProteinID:
XP_007268942
JGI:
Fomme1_158819
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MSTHFNDQEDSEVMPGGPPNTGNGPVIVPFTQEGLAKDITPGAEKPLWPLSSFGSAKSEP
TLIAGLDESPEELRWKAVQALKSGNIADYQKYESEKIQEADQTYAKALSEISQVFNHAYK
SAIAKQRGIPNPAGTVYNSPSNTASPAFGKSTTSAFGGGSAFGGGPSGATSAFGASTSAP
TSAFGSSTSASAFGKPSFGQSAFGQPAFGQSTFGQPSKPVSAFGQPSQTTSAFGQPAPTT
SAFGQPAQASTSGFGQTSQPQSSFIKPATGFGSSAGGGFSAFAGGGTSAFGAGPQQTQVP
AFGQSAFGGAGNNAAAVPTTSAFGTPSAPSAFGAPASSTQPTSAFGLPAKPVSAFGQPSQ
TASAFAQPSQPVSAFGKAAQAPAFGQTSASGQTAQPSAFDQTSQPSAFGQTSSSAFGQSS
QPVSAFGGAGAGASGGFAAAGLPPKPKVGPPDFAAALAAIKAEPGKDKHDGLLPRDYADK
LPTSVKEAFAAPRFEWGKIPEWVPPVDFR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccacttcaacgaccaggaggattcggaagttatgcccggtggccctcctaat
acgggtaatggaccagtaatcgttccattcactcaagaaggactagcgaaggacataact
ccaggtgctgagaagccattgtggccactgtcgagcttcggttctgcgaagtccgaacca
actcttattgcaggtctcgatgagtcgccagaagagctgcgttggaaggctgtccaagcg
ttgaagtcaggaaacatcgctgattatcaaaaatacgagtcagagaagatccaggaagca
gaccaaacatacgccaaagcattgtctgagatatctcaggtattcaaccacgcgtacaaa
tcagcaattgcaaaacaaaggggcattccgaaccctgctggaaccgtgtacaattctccg
tcgaatactgctagtcctgctttcggcaaatcaacgacatctgcgttcggtggtgggtca
gcttttggaggtggaccatctggagcaacgtcggcatttggtgcttcaacttctgctccc
acatcggcctttggctcatcgacttcggcatctgcatttgggaagccttcttttggccaa
tctgcattcggccagccagcattcggtcaatccacgttcggccaaccgtcaaaacctgtc
tctgcgttcggtcagccttcacaaacgacttcggcttttggacaaccagccccgactact
tcggcattcggacaacctgcacaagcttcaacgtcgggattcggtcagacttcacaaccg
caatcgtcctttataaagcctgcaactggcttcggaagcagtgctggtggtggattctct
gcattcgctggcggtggaacttctgccttcggtgctggcccgcaacaaactcaagttcct
gcttttggtcaatcagcgtttggtggcgcgggtaacaatgctgctgcagtaccaacaaca
tctgctttcggaactcctagtgcaccgtcagctttcggtgcccctgcgagttcgacccaa
ccaacgtctgcattcggacttcctgcgaaaccagtctccgccttcggacaaccgtcacaa
acggcaagcgctttcgcacaaccttcacagcctgtctcagcatttggaaaggcggctcaa
gctcctgcgtttggacagacctccgcatccggacaaactgctcaaccgtctgcattcgat
cagacgtcccaaccatcagcctttgggcagacgtcttcatctgcttttggtcagtcttca
cagcccgtatctgcattcggcggggctggagctggagcaagtggtggttttgctgcggct
ggtttaccaccaaaaccgaaagtcggtcctccggatttcgctgcagcgcttgctgcaata
aaggctgagcctggaaaggacaaacatgatgggctattgccacgagattacgcagataag
ttacccacatctgtgaaggaagcgtttgctgctccgcggtttgagtggggtaagatacct
gagtgggttccacctgtcgatttccgttag
DBGET
integrated database retrieval system