Fomitiporia mediterranea: FOMMEDRAFT_170938
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Entry
FOMMEDRAFT_170938 CDS
T03132
Name
(RefSeq) NAF1-domain-containing protein
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_170938
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
FOMMEDRAFT_170938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
18677233
NCBI-ProteinID:
XP_007271133
JGI:
Fomme1_170938
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MFKVPSSIPQDLLLIHDIVSEPIPGPSSVKPRTSEDAKTRSESSNSIDSSSASSDSETDS
EEVDAVESLLIDPDALVEVVNAKPRSPSPSSSESSSDDSSSDGDSDAEEKTRPVTTRKPV
VEDYEDDDEDEHDSRLPSSSSLRTKNELVDSSVTLPEITEIDPQEPLEKVGEIMSIIENV
VVVKGLASQNENKASERALDSESLLVFEDRKVLGYIHETFGPTYQPLYQVKFSSAASIDK
SMMSVGREVFHAPRRSHFVFPSQLRKMKGSDASNVHDEEVNEDEMEFSDDEAEAAYRQQR
KRKREGYRESSVSSSRFSTPTPTQMRDQELKDSSFYNASPYDEYGPYDIDSAPGPSRPAP
LPYDDPYQDVPVAPSESGAERTREERSRSPSSPRSFMPDRSRGRGRGRGYDRGRGRGRGR
EHGGGRGGFRGRRPSGETPWAERQGSRPRSYSRSDSRSLSPTSMAIARATGQFADNSAFP
SQLLSPSSPSTSTQGYWQRQQENTVYGQYTDPSQHQAYGGSSAPQMSSYDQQSQNQNYSQ
PHINPRFASLFAMNMNFMQGQQYNAYAAPNSPVASPYSAYSPNSSWEGNAWTQSGPQGNA
SGSGTQPDGTNEYAVQMTPETDEYRP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagtaccaagtagcataccgcaggacttgcttctcatacacgacattgtttca
gagcctatccctggtccctcaagtgtaaaacctcggacaagcgaagatgcaaaaacacgg
agcgaatcttctaattctatcgactccagttctgcatcttcggatagtgaaacagacagc
gaagaggtagacgctgttgaaagcctacttattgatcctgacgcgctagttgaagttgtc
aatgctaaacctcgttcgccatcgccatcttcttccgagtcttcttccgacgattcaagt
tcggatggagactccgatgcggaggagaaaacccgtcccgtaactactaggaaacccgtt
gtcgaggattacgaagacgatgacgaagacgagcacgactctcgcctcccttccagttcc
tctcttcgaaccaaaaacgaactagtcgactcttccgttacactcccagaaattacagag
atcgacccacaagaacctttagaaaaagtcggagaaataatgagcataatcgagaacgtc
gtagtcgtcaaaggccttgcgtctcaaaatgagaacaaagcttctgagcgggcgttagac
tcggagagtttattggtctttgaggataggaaggtgcttggttatattcatgagaccttt
ggtccaacttaccagcctctttaccaagtcaaattctcttcagctgcttcgattgacaag
agtatgatgtcagttggccgtgaagtattccacgccccacggcgcagtcatttcgttttc
cccagccagctacggaagatgaagggtagtgatgcgtctaacgttcacgacgaagaggtt
aatgaggacgaaatggagttctctgacgacgaagcagaagcagcttacaggcagcagcgt
aaaaggaaacgagaaggttaccgcgaatcttccgtatcgtcatcccgattctccacacca
actcctacacaaatgcgagaccaagagctcaaggatagttccttctacaacgcatctccc
tacgatgagtacggcccgtatgatatcgattcagcaccaggaccatctcggcctgctcct
ctcccttacgacgatccctatcaagacgtacctgtagcaccttcggagagcggagctgaa
cggacaagggaagagaggtctagatcacctagtagccctcgaagtttcatgcctgatcgt
tcgcggggacgaggccgcggaagagggtatgatagaggacgagggcgtggacgtggacgt
gaacatggtggtggtcgaggtggttttcgcgggcggagaccgagtggagaaacaccttgg
gcagaacgtcaaggttctcgtccaagaagctacagtcgaagcgactctcgttctctctct
cctacttcaatggctatcgctcgagcaactggccagttcgcagacaactcagctttccct
tctcaacttctatcgccatcgtcaccctcgacttccacgcaaggttactggcaacgacaa
caagaaaatacagtatatggacaatacaccgacccatctcaacatcaggcatacggtggt
agtagtgcccctcaaatgtcttcgtacgaccagcagagccagaaccaaaactactcgcaa
ccgcatataaatccgcgtttcgcctcgttatttgctatgaacatgaatttcatgcaaggg
cagcagtataacgcatatgctgcaccgaattcccccgtagcgagtccgtactccgcttat
agtcctaactcttcctgggaggggaatgcttggacacagagcggaccacaggggaatgct
agtggtagtggtactcagccagatgggactaatgagtatgctgtacaaatgacgcctgaa
actgacgagtaccgtccttag
DBGET
integrated database retrieval system