KEGG   Fusarium oxysporum: FOXG_09448Help
Entry
FOXG_09448        CDS       T04882                                 

Definition
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
fox  Fusarium oxysporum
Pathway
fox03030  DNA replication
fox03410  Base excision repair
fox03420  Nucleotide excision repair
fox03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fox00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    FOXG_09448
   03410 Base excision repair
    FOXG_09448
   03420 Nucleotide excision repair
    FOXG_09448
   03430 Mismatch repair
    FOXG_09448
Enzymes [BR:fox01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FOXG_09448
    6.5.1.6  DNA ligase (ATP or NAD+)
     FOXG_09448
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     FOXG_09448
DNA replication proteins [BR:fox03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    FOXG_09448
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     FOXG_09448
DNA repair and recombination proteins [BR:fox03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FOXG_09448
   NER (nucleotide excision repair)
    Other NER factors
     FOXG_09448
   MMR (mismatch exicision repair)
    Other MMR factors
     FOXG_09448
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase MctB
Motif
Other DBs
NCBI-GeneID: 28951010
NCBI-ProteinID: XP_018246711
UniProt: A0A0J9VCK5
LinkDB All DBs
Position
9
AA seq 926 aa AA seqDB search
MLLSVRSTRGLTIAPLFLQNTSRLISRPVNCCSLCSLRLFSTRIPGIMAPKQATLGYVKS
GQSTIGKFFGAKGAPPQQTKLSFSSKPKKEEAKHEEEANMNTKSGSDSEKETKKRARSED
KTKPELTPIKKEEVDDESDGPVTKRARRSRKRVEDEDDDEMIEETVKKEKHASPNKSKVA
STPPKVKSPKRSKATPKAKAAEEPTPEENDESAKEEASTASASEAELDDEADVEDKPEVA
AKAREKVQTKFKSKTKDPYPDWKPGTPIPYAALCTTFSLVEMTTKRLIIMEHCSLFLRQV
MRLTPEDLLPTVLLMINKLAPDYAGIELGIGESLIMKAIGETTGRSLQVIKADQKEIGDL
GLVAVKSRSTQRTMFKPKALTIRGVHQGLMNIATVTGNGAQGRKVDGIKKLLAAADANST
GKVDITKDKGGPSEAKFIIRFLEGKLRLGLAERTVLVSLAQAIVAHEADAKGKVPSTSDL
EKGESILKTVYSELPSYDVIIPAMLEHGIMKLRENCKLRPGVPLKPMLAKPTKAITEVLD
RFEGQTFTCEYKYDGERAQIHYVAKDAPQELNEASQGAAKEAAAGVASIFSRNSEDLSRK
YPDILAKLHTWVKPDTKSFVLDCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCV
FAFDLLYLNGEAVVEKALRERRELLETAFNPVEGEFSFATHMNGQELDEIQVFLDESVKA
SCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYG
AFLLACYNPNSETYETVCNIGTGFSEQVLEDLHTQLSEITIDRPKPFYSHSSGGQHQPDV
WFEPRYVWEVKTADLTLSPRYKAGAKEGVDPSGNKGISLRFPRFIRVRDDKKADAATTSR
QVAEMYRKQESVTKNKGPSVDDDFEY
NT seq 2781 nt NT seq  +upstreamnt  +downstreamnt
atgctactcagtgtcaggtcaactcgcgggctcacaattgcccctctctttctacaaaac
acttccagattaatatcacgacctgtaaattgttgttccttgtgttcgttgcgtttgttt
tcgacaagaattccaggcatcatggcaccaaaacaggcgactctcgggtatgtcaagtcc
ggacagagcacaatcgggaagttctttggggcaaaaggtgcgcctcctcaacagacaaag
ctctccttcagcagcaaacccaaaaaagaagaagcgaagcacgaggaggaggctaacatg
aataccaaatcgggctcagattctgagaaagaaacaaagaagcgagcaagatcagaagac
aagaccaagcccgagctgacgcccattaagaaagaggaagtcgatgacgagagcgatgga
cctgtcaccaagcgagcacgacgaagtcgaaagcgagtcgaggacgaagatgacgatgag
atgattgaagaaactgtgaagaaagagaaacatgcatcccccaacaagtcaaaggtcgcg
agtacacccccaaaggtcaagtcgcccaagaggtcaaaggcaacccctaaagccaaggcg
gccgaagaacctactcccgaggagaacgacgagtctgccaaagaagaagcatcgacagct
tcagcttcagaagccgagcttgacgacgaggcagatgtcgaagataagcctgaagttgct
gccaaggctcgcgagaaggtccagacaaagttcaagtccaagacgaaagacccctatcct
gactggaagcccggcacccctattccgtatgcggccctgtgtacaacgttctctcttgtg
gaaatgaccaccaaaagattgattattatggagcattgctctctgttccttcgccaagtc
atgcgcctgacccctgaggatctattacctacagtcttattaatgatcaacaaattggct
cctgactacgctggtatcgagcttggtattggcgagtcgttaatcatgaaggctatcggc
gagacgaccggacgaagcctccaggtgattaaggctgatcagaaagaaattggtgatctt
ggattggtggctgtaaagagtcgatcaacccagcgcactatgttcaagcccaaggctttg
actatcaggggtgtgcatcaaggcctaatgaacattgctactgtcactggtaacggtgct
caggggcgcaaggtggatggtatcaagaagcttcttgctgcagctgatgccaactccact
ggcaaagtcgacatcaccaaggacaagggaggaccgagtgaagccaagttcatcattcga
ttcctggaaggaaagctgagacttggtttggctgagagaaccgttcttgtttctttggcg
caagctattgttgcccacgaggcagatgccaagggtaaggtccctagcacctcagatctt
gagaagggtgaatcaattctcaagacggtctacagcgaacttccgagctacgacgtgatt
attcctgcaatgctagaacatgggatcatgaagcttcgggaaaattgcaagctccgaccc
ggtgtacctttgaagcccatgctggccaagccaaccaaggccattactgaagtactcgat
cgctttgagggacaaaccttcacctgtgagtataagtatgatggcgaaagagcacaaatc
cattatgtggcaaaagatgcgcctcaagaactaaacgaagcgagtcaaggcgccgctaag
gaggccgctgctggtgttgctagcatcttctccagaaactccgaagatctctccaggaag
tatcccgatattcttgccaaactccatacctgggtcaagccggacaccaagagctttgtc
ctggattgtgagacagtggcctgggatgtcgatgagaagaaagtgttgcccttccagcaa
ctcatgacacgcaagaagaaggacgtcaaggttgaggatgtcaaggtcaaggtttgcgta
tttgcatttgatctgttgtacctcaatggagaagccgttgtcgagaaggcactgcgtgaa
cgacgtgagcttctcgaaaccgcgtttaatcccgtggaaggcgagttttccttcgctacc
cacatgaacggccaggaactggatgagatccaggttttccttgatgaaagtgtcaaggca
tcatgcgagggtctgatggtaaaaatgctggatgggactgagagtggatatgagcccagt
aagcgaagtcgtaactggctcaagatcaagaaggattacctctcaggcgtcggtgattcc
ctggatcttgttgttttgggcgcatactacggcaaaggcaagcgtacatctgtttacggt
gcattccttctggcctgttacaaccctaactcagagacatacgaaactgtttgcaatatt
ggaactggcttctcagaacaggtcttggaggatctccacacccaactctctgagattacc
attgataggcctaagcctttttactcacactcttctggtggtcaacaccaacctgatgtc
tggtttgagcctcggtatgtctgggaagtcaagacagccgatttgaccctcagtccacgt
tacaaggccggtgctaaggaaggtgtcgacccgtcaggaaacaagggcatcagtcttcga
ttccctcgcttcatccgtgtgcgagatgataagaaagctgatgctgccacgacaagtcgc
caggttgctgaaatgtatcgcaaacaggagagcgtgacaaagaacaagggcccctctgtt
gatgatgactttgagtattag

DBGET integrated database retrieval system