Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_1446
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Entry
Fphi_1446 CDS
T00652
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Pathway
fph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fphi_1446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fph03019
]
Fphi_1446
03009 Ribosome biogenesis [BR:
fph03009
]
Fphi_1446
Enzymes [BR:
fph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Fphi_1446
Messenger RNA biogenesis [BR:
fph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Fphi_1446
Ribosome biogenesis [BR:
fph03009
]
Prokaryotic type
rRNA helicases
Fphi_1446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SecA_DEAD
SNF2-rel_dom
AAA_22
PRAI
AAA_30
SLFN-g3_helicase
Uricase
Motif
Other DBs
NCBI-ProteinID:
ABZ87671
UniProt:
B0TYS5
LinkDB
All DBs
Position
complement(1578840..1579928)
Genome browser
AA seq
362 aa
AA seq
DB search
MLFSDLNLSQNIIEILENKNIKIPTNSQILSFEKISNGENIWLKSPTGSGKTLAYILPIM
NKLLIDKKPLTQVVFFTPTHELAIQISNFINETFSSIGIKSLALIGKASIDRQKEKLKKK
PNIVVGSVGRILELIDQKKLKATHLQYCIIDEADRMLEDDSLKLLKQIISKTTNLQYILG
SATIKNHAFDIASSFIENLELIDNSKEKETIEHSYITADGNRKTDTLRKLLNKISPSKSI
VFLHRNNDVDFVTKKIDKLECGVGSIHGEQNKIDRANTIKKFKSGQIKVLVASDVAARGL
DINDVDFVINYDIPSKAEDYQHRAGRTGRMGKSGNSILIIKETEFSYIEKLQKKLGIDIK
KF
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcagacttaaacttaagccaaaacatcatagaaatattagaaaataaaaat
atcaaaatacctacaaactcacagattttaagctttgaaaaaatctcaaatggagaaaat
atctggctaaaatcaccaactggtagcggtaaaacacttgcttatattttgccaattatg
aataaattattaatagataaaaaacctcttacacaagttgtttttttcacacctactcat
gagttagccattcaaattagtaattttataaatgagacattctcaagtataggcattaaa
tcactagcactaattggtaaagcatcgatagacagacaaaaagaaaaattaaagaaaaaa
ccaaatattgtagttggctctgttggcagaattctagaacttatagatcaaaaaaaacta
aaggctactcatctacaatactgtattattgatgaggcagatcgtatgcttgaagatgac
agcttaaagcttttaaaacaaatcatctctaaaaccacaaatctacaatatatattaggc
tctgctactatcaaaaaccacgcctttgatattgcgagtagttttatcgaaaatttagag
cttattgataactccaaagaaaaagaaactatagaacatagctatatcacagctgatggt
aatcgtaaaaccgatacattacgaaagttactaaacaaaatatctccttccaaatctata
gtatttctacatagaaacaatgatgttgatttcgtcacaaaaaaaatagataaactagaa
tgtggggttggctctattcatggtgaacaaaataaaattgatagagctaataccatcaaa
aaattcaaaagtggacaaatcaaagttttagttgcctctgatgttgcagctagaggactt
gatattaatgatgttgattttgtaataaattatgatatcccatccaaagcagaagattac
caacatcgagcaggtagaacaggtcgtatgggtaagtccggcaatagtattctaatcatt
aaagaaactgaattctcttatatcgaaaaactacaaaagaagttaggaattgatattaag
aagttttaa
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