Flavobacterium psychrophilum v4-33: IA06_01255
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Entry
IA06_01255 CDS
T03661
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fpk
Flavobacterium psychrophilum v4-33
Pathway
fpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IA06_01255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpk03400
]
IA06_01255
DNA repair and recombination proteins [BR:
fpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IA06_01255
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IA06_01255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AIG40520
UniProt:
A0A075SHF5
LinkDB
All DBs
Position
complement(283749..284465)
Genome browser
AA seq
238 aa
AA seq
DB search
MQIKTKAIVISAIKYQEKSLIVKCFTLSDGLKSYFVRDAFSSKKSNQKIAYFQPLTILEI
EAVHKNKGTLERFKEVKIATPFHSIHYDVIKSTIVIFISEILHHSIHEEEKNEAFFTFLE
TALHWLDNHDQIANFHLILLLETTKYLGFYPDISNTEHPFFEMTEGLFSPFHAISSLTEH
ETNLFKKLIDLKFDNSNTNTLHSTERQILLKILINYYSYHLDGFKKPKSLEVLKEVFS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaaaccaaagctattgtaatttctgccatcaaataccaagaaaaaagttta
atcgttaaatgctttacgctttccgatggactaaaatcttactttgttcgcgatgcgttt
tcatctaaaaaatcaaaccaaaaaatcgcttatttccagcccttaacaatactagaaata
gaagctgtacataaaaacaaaggcactttagagcgttttaaagaagtaaaaatcgcaaca
ccttttcattctattcattatgatgtgataaaaagcactattgtaatatttatttccgaa
attttacatcattcgattcacgaagaagaaaaaaacgaagccttttttacttttctcgaa
accgctttgcattggttagacaatcatgaccagattgctaattttcacctcattttactc
ttagaaaccacaaaatatttaggattttatccagacatctcaaacacagaacaccctttt
ttcgaaatgaccgaaggcctgttttctccctttcacgccattagttcgcttaccgagcac
gaaaccaatttatttaagaaactcatcgatttaaaatttgacaactcaaatacaaatacc
ttacacagtacagagcgtcaaattttattaaaaatcctcatcaattattacagttatcat
cttgatggtttcaaaaaaccaaaatctttagaggtactcaaagaagttttttcataa
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