Flavonifractor plautii: A4U99_12970
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Entry
A4U99_12970 CDS
T04429
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
fpla
Flavonifractor plautii
Pathway
fpla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fpla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4U99_12970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpla03021
]
A4U99_12970
03400 DNA repair and recombination proteins [BR:
fpla03400
]
A4U99_12970
Enzymes [BR:
fpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4U99_12970
Transcription machinery [BR:
fpla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4U99_12970
DNA repair and recombination proteins [BR:
fpla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4U99_12970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANU41919
UniProt:
A0A1C7FPR3
LinkDB
All DBs
Position
2678073..2681780
Genome browser
AA seq
1235 aa
AA seq
DB search
MVKDVYYGKTLRKSFARHEEILDMPNLLEVQKNSYQWFLDTGLREVFKDVASITDYAGNL
ELSFIDYSMDEPPKYSVEECKARDATYAAPIKVRVRLRNKETEEIKEQEIFMGDFPLMTK
AGTFVINGAERVIVSQIVRSPGIYYSHTEDKAGGITYATTVIPYRGAWLEYETDLNDAFY
VRIDKNRKLPITCLIRAVGPKTDPEILELFGEDPRIVATLEKDACKTYEDALLEIYRKLR
PGEPPTVDSAESLLNALFFDPRRYDLSAVGRYKFNKKLSIWTRLVNQTLAAPVADPMTGE
IIAEPGEVLTRERAHELDDRGVNEVVLELDGVQIKVFSNHMVDMSKFVDFDPEECGVSEK
VRFTVLQELLQNYTGEELKEAVKERIDDLIPKHIIVDDIMASINYLNCLAHGVGSADDID
HLGNRRLRCVGELLQNQFRIGFSRMERVIRERMTIQDLDIVTPQSLINIRPVTAAIKEFF
GSSPLSQFMDQTNPLAELTHKRRMSALGPGGLSRDRASFDVRDVHYSHYGRLCPIETPEG
PNIGLISYLASYARINRYGFIEAPYRKVDKATGHVTDQVDYMTADVEDQYTIAQATEPLD
ENGCLVHDRITCRHRNEIIDVDRDQVDYMDISPKMMFSIATAQIPFLENDDANRALMGAN
MQRQAVPLLTTQAPIVATGQEHKNCIDSEVAILAEDDGVVTKVAADSVSVRYDDGRVEDY
QLTKYLRSNHGTCINQRPIVDAGQRVEKGEVIVDGPSTNNGEIALGKNILMGFMTWEGYN
YEDAILLNERMVKEDVFTSIHIEEYETESRDTKLGPEEITRDIPNVGEDALKDLDERGII
RVGAEVRAGDILVGKVTPKGETDLTAEERLLRAIFGEKAREVRDTSLKVPHGESGIIVDV
KVFTREAGDELSPGVNMVVRVYIAQKRKISVGDKMAGRHGNKGVVSRILPQEDMPFLPDG
TPLDIVLNPLGVPSRMNIGQVLEVHLGYAAKTLGWKVATPVFNGADEKDIAETLKMAGLR
PDGKSWLYDGRTGERFDNPVTVGYVYFLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQF
GGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVTGRVRTYESIVKGHNVPKPGVPESFKV
LVKELQSLCLDIKVLDDQGAEIELKDDDEDNYQPGKFRDEDDDYYGYDAGGESDFAAAGY
TLKEGSDDDDLAAADAEELDDSDDFSDDYSDEDMD
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggacgtctactacggcaagaccctccgcaagagctttgcccgccatgaagaa
atcctggacatgcccaacctcctggaggtgcagaagaactcctatcagtggttcctggac
acgggactgcgggaggtcttcaaggatgtggcctcgatcaccgactacgcaggcaacctg
gagctctccttcatcgactactccatggatgagccccccaagtacagcgtggaggagtgc
aaggcccgggacgccacgtacgccgcgcccatcaaggtgcgggtgcgcctgcgcaacaag
gagaccgaggagatcaaggagcaggagatcttcatgggcgacttccccctgatgaccaag
gccggcaccttcgtcatcaacggcgccgagcgcgtcatcgtctcccagatcgtccgctcc
cccggcatctattactcccacaccgaggacaaggccggcggcatcacctacgccaccacc
gtcatcccctaccggggcgcctggctggagtatgagaccgacctgaacgacgccttctac
gtgcgcatcgacaagaaccgcaagctgcccatcacctgcctgatccgtgcggtgggcccc
aagaccgaccccgagatcctcgagctgttcggtgaggatccccgcatcgttgccaccctg
gagaaggacgcctgcaaaacctatgaggacgcgctgctggagatctaccgcaagctgcgc
cccggcgagccccccacggtggactcggccgagagcctgctcaacgccctgttcttcgac
ccccggcgctacgacctgtccgccgtgggccgctacaagttcaacaagaagctgtcgatc
tggacccgcctggtgaatcagaccctggccgcccccgtggccgaccccatgaccggcgag
atcatcgccgagcccggcgaggtgctcacccgggagcgggcccacgagctggacgacagg
ggtgtcaacgaggttgtactggagctcgacggcgtgcagatcaaagtattctccaatcac
atggtggatatgtccaagttcgtggactttgatccggaggagtgcggcgtcagtgagaag
gtacgcttcaccgtgctccaggagctgctccagaattacaccggcgaggagctcaaggag
gccgtgaaggagcgcatcgacgacctcattcccaagcacatcatcgtggacgacatcatg
gcgtccatcaactacctcaactgcctggcccacggggtgggctccgccgacgacatcgac
cacctgggcaaccgccgcctgcgctgcgtgggcgagctgctccagaaccagttccgcatc
ggcttctcccgcatggagcgggtgatccgggagcgcatgaccatccaggatctggacatc
gtcaccccccagagcctcatcaacatccgccccgtcaccgccgccattaaggagttcttc
ggctcctcccccctgagccagttcatggaccagaccaaccccctggccgagctgacccac
aagcgccgtatgtccgccctgggccccggcggcctgtcccgtgaccgcgcctccttcgac
gtgcgcgacgtccactactcccactacggccgcctctgccccatcgagactcccgaaggt
cccaacatcggcctgatctcctatctggcctcctatgcccgcatcaaccgctacggcttc
atcgaggccccctaccgcaaggtggataaagccaccggccacgtcaccgaccaggtggac
tatatgactgccgacgtggaggaccagtacaccatcgcccaggccaccgagccgctggac
gagaacggctgcctggtgcacgaccgtatcacctgccgccaccgcaacgagatcatcgac
gtggaccgggatcaggtggactatatggacatctcccccaagatgatgttctccatcgcc
accgcccagatccccttcctggagaacgacgacgccaaccgcgccctgatgggcgccaac
atgcagcgtcaggccgtgcccctgctgaccacccaggctcccatcgtggccaccggccag
gagcacaagaactgcatcgactccgaggtggccatcctggctgaggacgacggcgtggtc
accaaggtggccgccgactccgtctccgtccgctacgacgacggccgcgtggaggactac
cagctcaccaagtacctgcgctccaaccacggcacctgcatcaaccagcgccccatcgtg
gacgccggccagcgggtggagaagggcgaggtcatcgtggacggcccctccaccaacaac
ggcgagatcgccctgggcaagaacatcctcatgggcttcatgacctgggaaggctacaac
tacgaggacgccatcctgctcaacgagcgcatggtgaaggaggatgtgttcacctccatc
cacatcgaggagtacgagaccgagagccgcgacaccaagctgggccccgaggagatcacc
cgcgacatccccaacgtgggcgaggacgccctgaaggacctggacgagcgcggcatcatc
cgcgtgggcgccgaggtccgtgccggagacatcctggtgggcaaggtcacccccaagggc
gagaccgacctgaccgccgaggagcgcctgctgcgcgccatcttcggcgagaaggcccgc
gaggtccgcgacacctccctgaaggtaccccacggcgagagcggcatcatcgtggatgtg
aaggtgttcacccgcgaggcgggcgacgagctctcccccggcgtcaacatggtggtgcgc
gtctacatcgcccagaagcgcaagatctccgtgggcgacaagatggccggccgccacggc
aacaagggcgtcgtgtcccgcatcctgccccaggaggatatgcccttcctgcccgacggc
acccccctggacatcgtgctgaaccccctgggcgtgccctcccgtatgaacatcggccag
gtgctggaggtccacctgggctacgcggccaagaccctgggctggaaggtggccaccccc
gtcttcaacggcgccgacgagaaggacatcgccgagaccctgaagatggccggcctgcgg
cccgacggcaagagctggctgtatgacggccgcaccggcgagcggttcgacaaccccgtc
accgtgggctacgtctacttcctcaagctccaccacctggtggacgacaagatccacgcc
cgctccaccggcccctactccctggtcacccagcagcccctgggcggcaaggcccagttt
ggcggccagcgcttcggcgagatggaggtgtgggccctggaggcctacggcgcggcctac
accctgcaggagatcctcaccgtcaagtccgacgatgtcaccggccgcgtgcgcacctac
gagtccatcgtcaagggccacaacgtgcccaagcccggcgtgcccgagtccttcaaggtc
ctggtcaaggagctgcagtctctgtgcctggacatcaaggtgctggacgaccagggcgcg
gagatcgagctgaaggacgacgacgaggacaactatcagcccggcaagttccgcgacgag
gacgacgactactacggctacgacgccggcggggagtccgacttcgccgccgcgggctac
accctcaaggagggcagcgacgacgacgacctggccgccgcggacgcagaggagctggac
gacagcgacgacttctcggatgactattccgatgaggatatggactaa
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