KEGG   Fusarium pseudograminearum: FPSE_01790
Entry
FPSE_01790        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03020  RNA polymerase
fpu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FPSE_01790
  09124 Replication and repair
   03420 Nucleotide excision repair
    FPSE_01790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fpu03021]
    FPSE_01790
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_01790
   03400 DNA repair and recombination proteins [BR:fpu03400]
    FPSE_01790
Transcription machinery [BR:fpu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     FPSE_01790
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FPSE_01790
DNA repair and recombination proteins [BR:fpu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      FPSE_01790
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 20360409
NCBI-ProteinID: XP_009253184
UniProt: K3VR12
LinkDB
Position
1:3927177..3927856
AA seq 172 aa
MFFLYNLERKVTLHPSFMGRNMHELVTGKLLKDVEGTCAGSYFIISIMDAFEISEGRILP
GLGMAEFTVGYRAVVWRPFKGETVDAVVHSINPQGFFAHAGPLRLFVSAHLIPNDVKWDP
NATPPQFTNNEDTVIEPQTHVRVKIIGTRTEVGEMWAIGSIKEDYLGCLQAS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttttctttataacttggaacgcaaggtcaccttgcatccttctttcatgggtcgc
aacatgcacgagctcgtgacgggcaagctccttaaggatgtcgaaggtacatgcgctggc
agctacttcatcatctccatcatggatgctttcgaaatttctgaaggtcgaatcctccct
ggtctcggtatggccgaattcactgtgggatatcgtgctgtggtatggcggccattcaaa
ggcgagacggttgatgctgtcgttcattctataaacccgcaaggcttcttcgctcatgcg
gggcctctacggctctttgtgtcggctcatttgattccgaacgacgttaagtgggatccc
aacgcgacaccacctcaattcaccaacaacgaggataccgttatcgaaccacagacgcac
gttcgcgtgaagatcatcggcacaagaacagaggtcggcgagatgtgggcgataggaagc
atcaaggaggattacctgggatgtcttcaggcctcttag

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