Fusarium pseudograminearum: FPSE_04202
Help
Entry
FPSE_04202 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_04202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_04202
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
FPSE_04202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
20362820
NCBI-ProteinID:
XP_009255595
UniProt:
K3VLQ2
LinkDB
All DBs
Position
3:complement(4184817..4188723)
Genome browser
AA seq
1034 aa
AA seq
DB search
MALSHVFFASTQYIIIPQSDTFRFPVDVHLLGIEIRTVFSNLMSAEGGIYNASDHYHHRN
SIRCLSLSHEVMHVHQQEQSNRHVNIQSYALNDWCLLQLLKIVPGDSPEAFDRLFLRCRT
EDDGQMSKTGQERASLHTSDSKLDLKHLIQYPLSIAESRLANEREDQGHVRVLIRFPGLD
HNLMVPVSNRYSAQQSKACNFSSIDTVSRPPSTIINCTRNAHLFVATMEKSQDFKSLQES
VQKSLVSTTKTVNRIAAEDLSFQRTVNPNVGQQLDDRTSRILELSTRLLQSTGKACGVKA
PKLEDVEDIEMKWRGVVDVVDSSLEKADTALDEYTGLVKRKEPPASDSNQAKKPKSTTKV
IRNANISKPQLQFERKPDNFAPPPWKPILKAKPHASVSLKESLNIVPNEAGTPQYQHPYE
HEIVRMAYPKRVSREAEPIMYQPVDTTEATYVDTYEGVLEMLGELMKAKEIAVDLEHHDF
RSYVGLVSLMQISTREKDWIVDTLQPWRHKLEVLNQVFTNPKIVKVFHGAYMDIIWLQRD
LGLYVNGLFDTFFACGQLNYPAKSLAYLLSKFVDFDADKKYQLADWRLRPLPQEMLYYAR
SDTHYLLYIYDRVRNELVAASDKTDADKDLIGRALEKSREQSLSRYEHPDYDQETGEGSR
GWSSYIFKNSHMAFDSEQFSVFRALWKWRDDTARKEDESTNFVLGNRDISEIARINPPDA
KALHSLLPLNASLARSRFNEIWGYIKESKAKGGRSLLHFFTSMAPDSLMRNGVPIAARKT
TRLPDLDGEVTVSRLTRSQLFGDMPISTQWDASTRRPETEEDLIPFPWQKFVEQGTIEGD
VQHDTVTDPAVVPAQPNHVENAGGSAQVEEDDEEFTLKRGQKRKSEAVEESDSSEGGSES
SDSESDEEMQDDNGVIAIEDGSSGKAESRNARRKQRKAEEKKAKEEQLQRQEAKKARKAQ
KKQKKEDDKVKKFDAVPFDYSKATSVVNTKREPNTDVKGKKRVFDPYSKSADTDIKGARK
APPVRGERSATFKK
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggctctttctcatgttttctttgcctcaactcagtacattattatcccgcaatccgat
acattccgcttcccggttgatgtccatctgttgggcatcgagatccggaccgttttctct
aacctgatgagtgcagagggaggcatttacaacgcttcggatcattatcaccatcggaac
agcatcaggtgcctgtcactcagccatgaggtgatgcatgttcatcaacaagagcaatca
aacagacatgtgaacatccagtcctatgcactcaacgattggtgcctgctacagctcctc
aaaattgttccgggagacagcccggaggcatttgatcgtctatttttaaggtgtagaacc
gaagacgatggacaaatgtcaaaaaccggtcaagaaagagctagtctccacacgagtgat
tcaaagcttgatctcaaacatttgatccaatatccactttccatcgcagaaagccgatta
gccaatgagcgagaagatcaaggccatgttcgtgtcttgatcagatttcctggactggac
cacaatttgatggtaccagtctcaaatagatactcagcgcaacaaagcaaagcctgtaat
ttttcgagcatcgatactgtatcgcgaccaccaagcacaattatcaactgcacgcgcaac
gcgcacttatttgtcgcaaccatggagaagtcccaggatttcaagtcgctccaggaaagc
gtccagaagtcgcttgtctcgacaaccaagactgtgaaccggatcgcagctgaagacctg
agctttcagcgcacagtcaaccctaacgttggccaacaacttgacgatcgaacttcacgg
attctcgaactatctacacggctgctgcaatcaaccggaaaggcatgtggcgtcaaagcg
cctaagctggaagatgtcgaagatatcgagatgaaatggagaggtgtggtcgatgtcgtc
gattcttcactcgaaaaggccgacacagcgttggatgagtacacaggacttgtcaagaga
aaggagcctcctgcttctgattctaaccaggccaagaaacccaaatcgacaaccaaggtc
atccgaaacgccaacatctccaagcctcaacttcagtttgagcgaaagcccgacaacttc
gctccaccaccttggaaaccaatcctcaaagcaaagccacacgccagcgtgtctttgaaa
gagagcctcaatatcgtgcccaacgaagccggcacgccgcaatatcaacatccctacgaa
cacgagattgtccgcatggcataccccaaacgtgtttccagagaagctgaacccattatg
tatcagcctgtggacaccacggaagcaacttacgttgatacatatgaaggcgttctcgag
atgctgggagagctcatgaaggcgaaggagattgcggtagacctggaacatcacgacttc
agaagctacgtcggacttgtgtccctgatgcagatcagcacacgtgaaaaagactggatc
gtggatactctgcaaccctggcgccacaaactcgaggtcctcaaccaagtttttactaac
cccaagatcgttaaggttttccacggtgcgtatatggacataatatggctgcagcgagat
ttgggactttacgtgaacgggctctttgacacttttttcgcctgtgggcaacttaactac
ccggccaagagtcttgcgtacctactgtccaagtttgtcgacttcgacgcagacaaaaaa
tatcagttggcggattggagattacgcccactgccccaggagatgctgtactatgctcgg
tccgatacccactacctactttacatttatgatcgtgtacgaaacgagcttgttgcagcc
tcggacaaaactgatgccgacaaagacctcattggtcgtgctctagagaaatcaagggaa
cagtctctatctcgctacgaacatcccgattacgaccaagagaccggcgaaggctctcgc
ggttggagctcatacattttcaagaactcccacatggctttcgatagcgagcaattttct
gtctttagagctttgtggaaatggagagatgacacggccaggaaggaggacgagagcacc
aactttgttctcggcaacagggacatctcggaaattgctcgtattaacccaccagacgca
aaggcccttcacagcctactgcctcttaatgcatcgctagccaggtcgcgcttcaacgaa
atctggggatacatcaaggagtccaaggccaagggtggccgaagtttgcttcactttttt
acttcgatggcgccggatagccttatgaggaatggcgtacctatcgcagccaggaagacc
accaggttaccggaccttgatggagaggtcacagtcagcaggctgactcgatcgcagtta
tttggagacatgccgatcagtactcagtgggatgcttcgactcgacggcccgaaactgaa
gaggatcttattccgttcccctggcagaagttcgttgaacagggtacgattgagggagac
gttcaacacgataccgtcaccgacccggctgtggtccctgcacaacccaatcatgtggag
aatgcagggggcagtgctcaagttgaagaggacgatgaggaatttactctaaagaggggc
cagaagcggaagtcggaggcggtagaagaatctgactctagtgagggaggatccgaatcc
tcagattcagagagtgatgaggagatgcaagatgacaatggagtcattgctatcgaggat
gggtcgtctggtaaagcagaatctaggaatgcccgtcgcaagcagcgtaaggcagaggag
aagaaagccaaggaagaacaactccaacgacaagaggcaaagaaggcccgcaaagcccag
aagaaacagaagaaggaggatgacaaggtcaagaagttcgatgcagtgccttttgattat
agcaaggccacatcagtggtcaatacgaagagggaaccaaacactgatgtcaagggcaag
aagagggtgtttgacccctattccaagtctgcagacacggacatcaagggagctcgcaaa
gcacctccagtgagaggtgagcgaagcgcgacattcaagaagtaa
DBGET
integrated database retrieval system