Frankia casuarinae: Francci3_0647
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Entry
Francci3_0647 CDS
T00320
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fra
Frankia casuarinae
Pathway
fra03420
Nucleotide excision repair
fra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Francci3_0647
03430 Mismatch repair
Francci3_0647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fra03400
]
Francci3_0647
Enzymes [BR:
fra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Francci3_0647
DNA repair and recombination proteins [BR:
fra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Francci3_0647
MMR (mismatch excision repair)
Other MMR factors
Francci3_0647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABD10031
RhizoBase:
Francci3_0647
UniProt:
Q2JFB1
LinkDB
All DBs
Position
737553..740069
Genome browser
AA seq
838 aa
AA seq
DB search
MSGFFGDSHGGGSGIAGSVGTDVHGGAHVPYDLFGPAVLAPPVGGDEPGGFSSPRLDAEG
LLDGLNLQQRAAVVHIGAPLLVVAGAGSGKTRVLTHRIAYLLAARGVRPGEMLAITFTNK
AANEMRERVSALVGPRARAMWVSTFHSACVRILRSEAKRLGFGSTFSIYDAADAQRLITL
VTRDLDLDPKRHPARGLAAQISNLKNELIDWEAARDRATNHLERTVAEVYAAYQQRLAQA
NALDFDDLIMMTVNLLQSFPDVAEHYRRRFRHVLVDEYQDTNHAQYVLVRELVGQPAYFG
GGSAPVEPAEPAAGPGTWASGAVPPAELCVVGDADQSIYAFRGANIRNIVEFEEDFPNAA
VILLEQNYRSTQTILSAANAMIARNNQRKAKRLWSDAGDGEKIVGFAADNEHDEAAFVAE
EVDRLSDAKLARPADVAVFYRTNAQSRVFEEIFVRVGLPYRVVGGVRFYERKEIRDLLAY
LRVLANPSDTVNLRRILNVPRRGIGERAEAALAGFADVERIGFAQALERVDEVPGIAARS
AKAVREFTALLAELRAVAADNPVAVVEGVLERTGYLSELLAEDTVESQGRVENLQELVGV
VQEFARRLPEGTLAEFLEQVSLVADADQVPTDDGSDGVVTLMTLHSAKGLEFPVVFLTGL
EDGVFPHLRTLGDPTQLEEERRLAYVGVTRARIRLYLTRAVMRSAWGQPAYNPPSRFLGE
VPDTLVDWRRLADPPPAPAGTSWGSSGGFGSGATGRGAAGAPAARKPLPNSPFSGRARPA
ARAVLELRQGDRVTHDSFGLGVVVATGGVGDSAEATIDFGENTGTKRLLLRYAPVEKL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctttttcggcgattcccacggcggcggatccggcatcgccgggtcggtcggg
acggatgtccacggcggtgcgcacgtgccctacgacctgttcggcccggcggtgctggcg
ccgccggtgggcggggacgagcccggtggcttctcctcgccacgcctggatgccgagggc
ctgctcgacgggctcaacctgcagcagcgggcggcggtggtgcacatcggggcacccctg
ctcgtcgtcgcgggcgcggggtccggcaagacgcgggtgctgacccaccgtatcgcgtac
ctgctggcggcccggggggtccggccgggggagatgctggcgatcacgttcaccaacaag
gctgccaacgagatgcgcgaacgggtctcggcgctggtcggtccccgggcgcgggcgatg
tgggtgagcaccttccactcggcctgcgtgcgcatcctgaggtccgaggcgaagcgtctc
gggttcggctcgaccttctccatctacgacgccgccgacgcgcagcgtttgatcactttg
gtcacccgtgaccttgatcttgatcccaaacggcatcccgcccgaggtctggcggcgcag
atcagcaacctgaagaacgaactgatcgactgggaggccgcacgggaccgggccacgaac
cacctcgagcggaccgtcgccgaggtctacgccgcttatcagcagcggctggctcaggcc
aacgcccttgatttcgacgatctgatcatgatgacggtgaacctcctccagtcgttcccc
gacgtcgccgagcactaccggcgccgattccgacatgtgctcgtggacgagtaccaggac
acgaaccacgcgcagtacgtcctggtgcgtgaactcgtcggccaaccggcgtacttcggt
ggcgggtccgcgccggtggagccggccgagccggcagccgggccgggtacctgggcctcg
ggcgccgtcccaccggcggagctgtgcgtggttggcgacgcggaccagtcgatctacgcc
ttccgtggggcgaacatccgcaacatcgtggagttcgaggaggatttcccgaacgccgca
gtgatcctgctggaacagaactaccgctccacccagaccatcctctccgccgcgaacgcg
atgatcgcgcgtaacaaccagcgcaaggccaagcgactgtggtcggacgccggtgacggt
gagaagatcgtcggattcgccgccgacaacgagcacgacgaggcggcctttgtcgccgag
gaggtcgaccggctctcggacgcgaagctcgcgcggcccgccgacgtcgcggtgttctac
cggaccaacgcccagagccgggtgttcgaggagatcttcgtccgggtcgggctgccctac
cgggtggtcggcggggtgcggttctacgagcgcaaggagatccgtgatctccttgcctac
ctgcgggtcctcgccaatcctagcgacacggtgaacctgcgtcgcatcctgaacgtgccc
cggcgcgggatcggcgagcgggccgaggcggccctggcgggcttcgctgatgtcgagcgg
atcgggttcgcgcaggcactggagcgtgtcgacgaggtgccggggatcgccgcgcgctcg
gcgaaggcggtgcgcgagttcaccgcgctgctcgccgagctacgcgccgtagcggccgac
aacccggtggccgtggtcgagggggtgcttgaacgcaccggctacctgtcggaactcctc
gccgaggacaccgtcgagtcccagggccgggtggagaacctgcaggaactggtcggagtg
gtccaggagttcgcccggcggctgcccgagggtacgcttgcggagttcctcgagcaggtc
tcgctcgtcgccgacgcggaccaggttccgaccgacgacggttccgatggtgtggtcact
ctcatgacgctgcacagcgccaagggcctcgagttccccgtcgtcttccttaccggtctc
gaggacggcgtcttcccgcacctgcggaccctgggagatcccacccagctcgaggaggag
cgtcggctcgcctatgtgggtgtcacccgggcccggatccggctctacctgacccgcgcg
gtgatgcgcagcgcctggggccaaccggcctacaacccgccgtcgcgcttcctcggcgag
gtgccggacacgctggttgactggcgccggctggccgatcccccgccagcgcccgcgggg
acgtcctggggctcgtctggcgggtttgggtcgggcgcgaccggccggggcgccgccggc
gccccggcggcgcgtaaaccgctaccgaactcgccgttctcgggtcgcgcgcggccggcc
gctcgggccgtcctggagttgcgtcagggcgaccgggtgacgcatgacagtttcggtctc
ggagttgtcgtcgccaccggcggggtcggtgactccgcggaggcgaccatcgatttcggc
gagaacaccggcacgaagcgcctgctcctgcggtacgcccccgtcgagaagctctga
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