Frankia casuarinae: Francci3_1283
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Entry
Francci3_1283 CDS
T00320
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fra
Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Francci3_1283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fra03021
]
Francci3_1283
Transcription machinery [BR:
fra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Francci3_1283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2408
KORA
Motif
Other DBs
NCBI-ProteinID:
ABD10661
RhizoBase:
Francci3_1283
UniProt:
Q2JDI1
LinkDB
All DBs
Position
1534060..1535289
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AA seq
409 aa
AA seq
DB search
MPRNLGRSREGSDEIPPMSPTVLPREAQVDEVKDLITRGKEIGFLTTEDVTVAIQAAELP
PEQAETVLQVLNDEGIEVLEAGGESPDEADLLARRRREEEELALKAPTSDPVRMYLKEIG
KVPLLTAEEEVDLAKRIEAGLFASEKLAVATKKTSPQMRRDLEAIERDGQIAKRKLVEAN
LRLVVSIAKRYVGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAI
ADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPSPEEIAKEMDLTPDKVREILKVSQE
PVSLETPIGEEEDSHLGDFIEDCDAVVPVDAASFILLQEQLDSVLHTLSDREKKVIQLRF
GLTDGHPRTLEEVGREFGVTRERIRQIESKTLSKLRHPSRSQKLRDYLE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtaacctgggtcgatcccgagaaggaagtgacgagattccgcccatgagtcct
accgtcctaccccgcgaagcccaggtggacgaggtcaaggacctcatcacccggggcaag
gagatcgggttcctcaccaccgaggatgtcacggtcgccatccaggccgcggagctgccc
ccggagcaggccgagacggtgctgcaggtgctgaacgacgagggcatcgaggtactcgag
gcgggaggtgagagccccgacgaggcggatctgctggcccgccgtcgccgcgaggaggag
gagctcgccctcaaggcgccgacctccgacccggtgcgcatgtacctcaaggagatcggc
aaggtccccctgctcaccgccgaggaggaggttgatcttgccaagcggatcgaggcgggg
ctgttcgcctccgagaagctggcggtggccaccaagaaaacttccccgcagatgcggcgg
gacctcgaggccatcgaacgcgacgggcagatcgccaagcgcaagctggtcgaggcgaac
ctgcgtctcgtcgtctcgatcgccaagcggtacgtcgggcgcggcatgctgttcctggac
ctcatccaggagggcaacctcggcctgatccgggcggtcgagaagttcgactacaccaag
ggctacaagttctcgacctacgccacctggtggatccggcaggcgatcacgcgggccatc
gccgaccaggcacgcaccatccgcatcccggtgcacatggtcgagaccatcaacaagctg
atccgcatccagcggcagctcctgcaggacctcggccgggagccgagtccggaggagatc
gccaaggagatggatctcaccccggacaaggtgcgtgagatcctcaaggtctcacaggag
ccggtgtcgctggagacccccatcggtgaggaggaggactcccaccttggcgacttcatc
gaggactgcgacgccgtcgtcccggtcgacgcggccagcttcatcctgcttcaggagcag
ctcgactcggtcctgcacaccctgtccgaccgggagaagaaggtcatccagctgcgcttc
gggctcactgacgggcacccgcgtacgttggaggaggtcgggcgcgagttcggggtcacc
cgggagcgcatccgccagatcgagtcgaagacgctgtccaagcttcggcatccctcccgg
tcgcagaagctgcgcgactacctggagtag
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