Frankia casuarinae: Francci3_3406
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Entry
Francci3_3406 CDS
T00320
Name
(GenBank) AAA ATPase, central region
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
fra
Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fra03019
]
Francci3_3406
03009 Ribosome biogenesis [BR:
fra03009
]
Francci3_3406
04131 Membrane trafficking [BR:
fra04131
]
Francci3_3406
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fra04147
]
Francci3_3406
Messenger RNA biogenesis [BR:
fra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Francci3_3406
Ribosome biogenesis [BR:
fra03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Francci3_3406
Membrane trafficking [BR:
fra04131
]
SNARE
SNARE associated proteins
Others
Francci3_3406
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Francci3_3406
Exosome [BR:
fra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Francci3_3406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
AAA_lid_3
AAA_16
AAA_5
AAA_22
RuvB_N
AAA_28
AAA_18
TIP49
bpMoxR
AAA_33
AAA_24
nSTAND1
Mg_chelatase
IPT
AAA_25
AAA_17
AAA_19
Vps4_C
SKI
RNA_helicase
AAA_11
AAA_14
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
ABD12760
RhizoBase:
Francci3_3406
UniProt:
Q2J7I2
LinkDB
All DBs
Position
4040632..4041969
Genome browser
AA seq
445 aa
AA seq
DB search
MPIWHIRPYETVDYAATVRLLEEVRSTPGGPPINLTDTVLALRHELPETESPAVVAVAGE
HLVGAAVGRKEGGQGRVLTVAIAPAWRHHGIGSSLLQSVENLLLHAGCRRITTLITPGQP
GEEAFLNRGFTATGQVLYDKQIPLRPADVSTVERWGGALLSASEWSNLAGMEEERALIEK
RLLLPVRERELAEAYGVVIPTAMLLFGPPGTGKTSFARAVAARLEWPFVELLPSRLASGG
SGLAAELRSAINDLMGVERVVVFIDEVDEIAQSRETRPENQSVVNELLKAIPQFRGVQGR
LLICATNAVSALDPAFIRPGRFDLVLPVGPPDAKGRRVLLDGLLDRVANKEDIDLDAVVA
ATDLFTPADLSAVVQRSAAAAFHRAADGVKVGTGAGAESGGGGHGPTVTPLSTQDLLDAA
RLARPTISLTELDRFRRDAEAFTRI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatctggcacatccgtccctacgagaccgtcgactacgcggcgacagtacgcctg
ctggaggaagtgaggagcaccccgggcggcccgcccatcaacctcaccgacaccgtgctg
gcgctgcggcacgaactcccggagaccgagtcccccgcggtggtcgccgtcgcgggcgag
catctcgtcggtgccgcggtcgggcgcaaggagggcggccaaggccgggtgctcacggtc
gccatcgcgcccgcctggcgtcaccacggcattggttccagcctgttgcagagcgtggaa
aacctgctcctgcacgccggctgccggcggatcaccacgctgatcacccccgggcagccg
ggtgaggaggcgttcctcaaccgcggcttcaccgctaccgggcaggtactctatgacaag
cagattcccctgcgcccggcggacgtctccaccgtcgagcggtggggcggcgcgctgctg
agcgcctccgagtggtccaacctcgccgggatggaggaggagcgcgcgctcatcgagaag
cggctgctgctgccggttcgggaacgggagctcgccgaggcgtacggagtcgtcatcccg
acggcgatgctgctgttcgggccgcccggcaccggtaagacgtccttcgcccgggcggtc
gccgcccggctggaatggccgttcgtcgagctgctgccctcacggctggcctccggcggc
agtgggctcgccgccgagctgcggtcagcgatcaacgacctcatgggggtcgagcgggtc
gtcgtgttcatcgacgaggtcgacgagatcgcccagtcgcgggagacccgaccggagaac
cagtccgtcgtcaacgaactgctcaaggcgatcccgcagttccgcggggtgcagggccgg
ctgctgatctgcgcgaccaacgcggtctcggcgctggatcccgcgttcatccggcccggc
cggttcgatctcgtcctccccgtcggaccgccggacgccaaggggcgccgggtgctgctc
gatgggctgctcgaccgggtcgcaaacaaggaggacatcgatctggacgccgtcgtcgcg
gccaccgacctgttcacgccggccgatctctcggcggtcgtgcagcgctccgctgccgcc
gccttccaccgggccgccgacggggtgaaggtcggcaccggggcgggagcggaaagcggc
gggggcggccacggcccgacggtgaccccgttgagcacacaggacctgctggacgccgcc
cggctggcccggccgacgatcagtcttaccgagctggaccgcttccgtcgtgacgcggag
gccttcacccggatctga
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