Pseudofrankia inefficax: FraEuI1c_0842
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Entry
FraEuI1c_0842 CDS
T01354
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_0842
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FraEuI1c_0842
Archaeal homologous recombinant proteins
FraEuI1c_0842
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ADP78920
UniProt:
E3IW78
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All DBs
Position
complement(1065006..1066190)
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AA seq
394 aa
AA seq
DB search
MKFLHTSDWHIGKSLKGRSRLDDQEAVLREVVGIARDNEVDAVLVAGDVYDSAAPSAEAQ
RLAVQTLLGFQRTGAEVIVIAGNHDHPRSFEAYRPLMGAAGITMVGTPRRADKGGVIAFN
ARGTGEPVRVAVLPFLSQRFAIRAAELVTQTPAQNAARYDQVVRDLLTALRSGFSDEAVN
LVLAHLTVTGGQLGGGERLAQSIFDYYVPATAFPADAHYVALGHLHRRQTLPAPCPVEYC
GSPLAVDFGEQDNTPVVRVVTASPGTPASGVDIPVTTGRRLRTVRGTVAELADGAAEYGD
AYLRVWVREPARAGLREQVQEVLPNALEVRIDPEFAAAAAAAAAGDRPSRPSTGQRGPGE
LFHEYLGSQNVADDRVERLFARLHDEIVGAERDG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctgcacacgtccgactggcatatcgggaagtcgctcaagggccgcagccgg
ctcgacgaccaggaggcggtgctgcgggaggtcgtcggcatcgcccgggacaacgaggtc
gacgcggtgctggtcgcgggcgacgtgtacgactcggccgcgccgtcggccgaggcccag
cggctcgccgtccagacgctgctcggtttccagcgcaccggcgccgaggtcatcgtgatc
gccgggaaccacgaccatccacgctcgttcgaggcctaccggccgctgatgggggcggcc
gggatcacgatggtcggcacgccccggcgggcggacaagggcggcgtgatcgcgttcaac
gcccgcggcaccggcgaaccggtccgggtggcggtgctgccgttcctctcgcagcgcttc
gcgatccgggccgccgagctcgtcacccagaccccggcccagaacgcggcccgctacgac
caggtggtccgcgacctgctcaccgcactgcggtccgggttctcggacgaggccgtgaac
ctggtcctcgcgcatctgaccgtcaccggcgggcagctcggcggcggcgaacggctggcg
cagtcgatcttcgactactacgtgccggcgaccgcgttccccgccgacgcgcactacgtc
gcgctcggccacctgcaccgccgccagacgctgccggcgccctgcccggtcgagtactgc
ggctcaccgctcgcggtcgacttcggcgagcaggacaacacccccgtcgtccgcgtcgtc
accgcctcgccgggcacgcccgcgagcggcgtcgacattccggtgacgaccggccggcgg
ctgcggaccgtgcgcgggacggtggccgagctggccgacggggccgccgagtacggcgac
gcctacctgcgggtctgggtgcgtgagccggctcgggccgggctgcgcgaacaggtccag
gaggtccttccgaacgccctcgaggtccggatcgaccccgagttcgccgccgccgcggcg
gccgccgccgccggcgaccggccgagccgcccgtccaccggccagcgcggcccgggcgag
ctgttccacgagtacctgggcagccagaacgtggccgacgaccgggtcgagcggctgttc
gcccggctgcacgacgaaattgtcggagccgagcgggatggttag
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