Francisella salina: F7308_1845
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Entry
F7308_1845 CDS
T01560
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
frt
Francisella salina
Pathway
frt03030
DNA replication
frt03430
Mismatch repair
frt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F7308_1845
03430 Mismatch repair
F7308_1845
03440 Homologous recombination
F7308_1845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frt03032
]
F7308_1845
03400 DNA repair and recombination proteins [BR:
frt03400
]
F7308_1845
Enzymes [BR:
frt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F7308_1845
DNA replication proteins [BR:
frt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F7308_1845
DNA repair and recombination proteins [BR:
frt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F7308_1845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
SpoVAE
Motif
Other DBs
NCBI-ProteinID:
AEI36769
UniProt:
F8GAG6
LinkDB
All DBs
Position
complement(1893095..1896574)
Genome browser
AA seq
1159 aa
AA seq
DB search
MFSHLRIHTGFSVVDSTVRLSDLFARAKDKNIPAVALTDVCNLFAAVKFYKQALSNGIKP
IFGVELKIDTEFGVCDLVLLAENNQGYQNIVDLVSKAYQEAERFGSIPLIPKSCLKDTKL
DNVICLNGGQYGEFGQAVLAKDIEKAEQVIAENIAIFGVDNYIVEIHKLGYENEGLYNEK
ALELVSKHNLIAVATNLTVFMESDDYDIHEIRACINEKTTILDESRKSKFTREQYLKSAD
EIYQIFSELPVLLENTLAIAKRCNVTFDLGKPCLPTVDIPDGLTEREYFSKLCYQGLDKR
LAKILENRPADKHEHIIKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKQSVGQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YDEMQADEEVAEIVEKAQKLEGLPRSLGKHAAGIVISPTVISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIIKNAIASINAKRPANETPLDISDIPLDDEKTFKLLQA
GKTIGIFQLESQGMQQIVKDLGTSNFEEIIALVALYRPGPMENIPTFVDRKHGRKQTIYL
HPLLEEVLRETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIEAGLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDAKNMGITVLAPNVNKSVHDCIAASKGTILLGLGAIKGLGGEAIKS
ILNEREVGGEFSSIFDLTRRVDLRKVNKKALEALCFAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMAAAGQNDLFGFTEQESDTDTELERECIVEEWNLRELLINEKKALGMYFSGHII
DGESHWRNHVSFSDLEKIQKPNMDGNSVRIIASMITPPARRKTKTGRVLYIINIDDEFER
ADCLVGEDVFAAVKDNIQVDDVVVVEGKVSYDKQRECNKLSVDKVQPISQYIDENFSKVE
LNLRSQNVNPTNLKKVLDNLKKNIATIDIQRENVLEIKVSLDDVDAKFEYFRKPFSVYEF
VNDISRLIAEGTTVSLSGL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcaccttcgtatccatactggattttctgttgtcgatagtactgttcgtttg
agtgatctctttgccagagcaaaagataagaatatccctgcagtagcactgacggacgta
tgtaatttatttgctgcagttaaattttataagcaagctttgtcaaatgggattaagcct
atctttggtgtagagctaaagattgatactgagtttggtgtttgtgatctggttttattg
gcagagaataatcaaggctatcaaaatattgttgatttagtttcaaaagcatatcaagaa
gctgagaggtttggctcaattccactaattcccaaaagttgtttgaaagatactaaatta
gataatgttatttgtttaaatggtggtcaatatggcgaatttggacaagctgtattggct
aaagatattgaaaaagcagagcaagtaatagctgaaaatatcgcaatatttggtgttgat
aactatatcgtagagattcataagcttggatatgaaaatgagggcttgtataacgagaaa
gcacttgaacttgtaagtaagcataatcttatagctgtagctacaaatttaactgttttt
atggaatcagatgattatgatatccatgaaattagggcttgtatcaatgaaaaaacaaca
attcttgatgagtcgcgtaaatctaaatttacaagagaacagtatctaaagtcagctgat
gagatatatcaaattttttcagagctaccagtattgttagagaatactttagcaatcgca
aaaagatgtaatgtaacatttgatttaggtaaaccatgtttgccaacggtagatattcca
gatggtttgacagaaagagagtacttttcaaagctatgctatcaaggtttagataaacgt
ttagcaaaaattttagaaaatagaccagctgataagcatgagcatattataaaagtttac
aaagatagactacaacgcgagatcgatattatctgcgatatgggctttcctggctatttc
ttgatagttgaagatttcattagatggtcaaaagagaatgatataccagtaggtccaggg
cgtggttctggtgctggctcattagtagcttattcattgcttattaccgatattgatcct
ttaccgtatggtttactttttgagagatttctaaatcctgaaagggtatctatgcctgat
tttgatattgatttctgtatccaaggtagagatagagttatcaaatatgtagagcaaaaa
tatggtaagcaaagtgttgggcaaattatcacctatggcactatggctgctaaaggtgtg
gtgcgagatgtagtgcgtgtgatggggcagagttttggttttggagataggattgctaag
ctaataccagaaacgccagggacaacatttaagaagattctccatgagggagagcccctg
tacgatgaaatgcaagcagatgaagaagtagcagagattgttgaaaaagctcaaaaatta
gaaggtctaccacgaagcttgggtaagcatgccgcgggtattgtgatatcgccaactgtg
atatcagattttgctcctgtatattgtgaagataaaggtggagatatagttacccaattt
gataagggcgatgtggaagatgttggacttgttaagtttgacttcttggggctaaagaac
ttaacaattatcaaaaatgctattgcaagcatcaatgctaaaagaccagctaatgaaacg
cctctagatatttctgatattcctcttgatgatgagaaaacatttaaactgcttcaagct
ggtaaaactatcggtatatttcagctagagtcacaaggtatgcaacagattgtcaaagat
cttggcacatcaaactttgaggagattatcgccttagtagcactatatcgtcctggtccg
atggagaatatcccaacattcgtagatcgcaaacatggcagaaagcaaactatctactta
catccattattagaagaagttcttagagagacttatggtatcccagtttatcaagagcag
gtaatgcaaatggcgcagaagctagctggttacactcttggtggagcagatttattgcgt
cgtgcgatgggtaagaaaaagccagaagagatggagcaacagcgtaaaatcttcaaagag
ggtgccgctaaatatcataatatcgaagctggacttgctgatgaaatatttgaccaaatg
gaagcctttgctggctatggtttcaacaaatctcatgctgcggcttacgcgttgattgct
tatcaaactgcttggttaaaagctcattatcctgatgaatatatggctgctcttatgtca
ggagatatgggtaatacagatcagttggttaaatttattttagatgctaagaatatgggt
atcacagtcttagccccaaatgtaaataagagtgtacatgactgtattgcagcttcaaaa
ggaacaattttattgggtctaggtgctatcaaaggtcttggtggtgaagcaattaaaagt
atacttaatgagcgtgaggtaggtggtgagtttagttctatttttgacttaactcgtaga
gtggacttgcgtaaggttaataaaaaagcactcgaagccttatgttttgcaggagctatc
aaggatatatctaaaaatagagcaacagcttttaattctatcgaaaaagctatcaaaaac
gctggttatgtgaatgaaatggctgctgcagggcaaaatgatttatttggtttcacagaa
caagagagtgatactgatacagagcttgaaagagaatgtattgtagaagagtggaatctt
agagagcttttgattaatgagaaaaaagcattagggatgtatttctcagggcatattatt
gatggtgaaagtcattggcgtaatcatgttagctttagtgatcttgagaaaatccaaaaa
ccaaatatggatggtaattctgtaagaattattgcaagtatgataacaccaccagctaga
cgaaaaactaaaactggtagagttctgtatattattaatattgatgatgagttcgaaaga
gcagattgtctagttggtgaagatgtatttgctgcagttaaggataatatccaagttgat
gatgtggttgtagtagagggtaaagttagctatgataaacaacgagagtgcaataaacta
agtgttgataaggtacaaccgatatcacaatatattgatgagaattttagtaaagttgag
ctgaatcttagaagtcaaaatgtaaaccctacaaacctaaaaaaagtattagataacctc
aagaaaaatatagccactattgatattcaaagagaaaatgtcttagaaataaaagtatct
ctagatgatgttgatgctaagtttgaatattttcgaaagcccttctcggtgtatgagttt
gttaatgatattagtaggttaatagctgagggtactactgttagtttgagtgggctttaa
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