Fibrobacter succinogenes: FSU_2969
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Entry
FSU_2969 CDS
T02105
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc02024
Quorum sensing
fsc03060
Protein export
fsc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FSU_2969 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FSU_2969 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FSU_2969 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fsc02044
]
FSU_2969 (ffh)
Enzymes [BR:
fsc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FSU_2969 (ffh)
Secretion system [BR:
fsc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FSU_2969 (ffh)
Eukaryotic Sec-SRP protein
FSU_2969 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_33
AAA_22
nSTAND3
NACHT
ATP_bind_1
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
ADL27401
UniProt:
C9RLI1
LinkDB
All DBs
Position
complement(3426332..3427696)
Genome browser
AA seq
454 aa
AA seq
DB search
MFSQLTDSLENTLKNLRGQGKLTEENVAESLREVRRAFLAADVNFNVTRDFVKSVKEKSM
GAEVLNSVTPGQQIVKIIHDELVAVMGGETKEINLSAPSPVGIMMVGLQGSGKTTFAGKI
ALWMRSKKKRKPLLVAADVYRPAAIKQLQVLGKSIGVPVYDEGQGNPVEIIKHGYQYAKD
NGFDLVIYDTAGRLQIDEELMQELEKARDAVHPDEILFVADAMIGQEAVNVAETFWNRLN
FTGVCLSKMDGDTRGGAALSIKKMTGVPICFIGVGEKLNEIDLFHPDRMASRILGMGDVV
SLVEKAQQVIDEKDAKDLKKKILNNTFDLNDFLKQLRTIKKLGRIKDILSLIPGLNKLPL
DQIDEKQLVYVEAVLSSMTPKERKKPQIIDGSRKARIAKGSGTDAARVNAVLKQYESMKE
MFKKVGDFAKRQNNGGTIGSNYTPPKDKNKKKKR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttttcacagctgactgattctctagaaaataccctcaagaacctgcgtgggcagggc
aaactcaccgaagaaaacgtggccgaatcgctgcgtgaagtccgtcgtgcgttcctcgct
gccgacgtgaacttcaacgtgactcgcgactttgtaaagtccgtcaaggaaaagtccatg
ggcgccgaagtgctcaattccgtgaccccgggtcagcagattgtgaagattatccacgac
gaacttgtggccgtcatgggtggcgaaactaaggaaatcaatctttccgcaccgtctccg
gtgggcatcatgatggttggtctgcagggttcgggtaagacgactttcgcaggcaagatc
gcactctggatgcgcagcaagaagaagaggaagccgctcctcgttgccgctgacgtttac
cgtccggccgctatcaagcagttgcaggtgctcggcaagtccatcggcgttccggtttat
gacgaaggccagggcaatccggtcgaaatcatcaagcacggctaccagtatgctaaggac
aacggttttgacctcgtgatttacgatacggcaggccgcttgcagattgacgaagagctg
atgcaggaactcgaaaaggcccgcgatgcggttcatccagacgaaattttgttcgttgcc
gatgctatgattggtcaggaagcagtgaatgtcgccgagacgttctggaaccgcctgaac
ttcacgggcgtctgcctctcgaagatggatggcgatacccgcggcggtgcagcgcttagc
atcaagaagatgacgggcgtgcctatatgctttatcggtgttggcgaaaagctgaacgaa
atcgaccttttccacccggaccgcatggctagccgaatcctcggcatgggcgacgtggta
tccctcgtggaaaaagcacagcaggtcatcgatgaaaaggacgcgaaggacctcaagaaa
aagattctcaacaacacgttcgacttgaacgacttcttgaagcagctccgcacgatcaag
aagctcggccgcatcaaggacattttgagcctcatcccgggcttaaacaagctccctctc
gaccagattgacgaaaagcagttggtctatgtggaagctgtcctcagctccatgacgccg
aaggaacgcaaaaagccgcagattatcgacggtagccgcaaggcccgtatcgcaaagggt
tccggcacggatgccgcccgcgtgaacgcagtgctcaagcagtacgaaagcatgaaggaa
atgttcaagaaggtcggcgatttcgccaagcgccagaacaacggcggtaccatcggttca
aactacaccccgcctaaagacaagaacaagaaaaagaagcgctaa
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