Fibrobacter succinogenes: Fisuc_2238
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Entry
Fisuc_2238 CDS
T01099
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Fisuc_2238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsu03400
]
Fisuc_2238
Enzymes [BR:
fsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Fisuc_2238
DNA repair and recombination proteins [BR:
fsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Fisuc_2238
Prokaryotic type
Fisuc_2238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ACX75824
LinkDB
All DBs
Position
complement(2754877..2756031)
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AA seq
384 aa
AA seq
DB search
MTERNHFLIFPRIMTPDSLKRLREWFRANAAELPWRPAGLDAPRDPYAVWISETMLQQTQ
VSTVRDYFTRWMKRFPDVEALAKAEEAEVFKYWQGLGYYSRARNILKTAKIVAALRQAQE
PCKMPETRKELEALPGIGAYTAGAILSLAYHQREAILDGNLVRIFSRLYELDFLPTDKGS
ANKNCTEIYWEYAREVADSPKAYMHNEALMELGRTVCKTKSPLCETCPLRGECRAFQECR
TTEFPPAKKRTEKSWHGTVLVVESADEKILAVNGGQKFLDKQLALPHFESARHATVALPA
KAEDYINADEVKSVEYCGTFRHSITVHKIECDVLHVQLLTKAKASHLPTENSDKPTAFEW
IEKAKAFETFANSFSLKALKKVFC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacgcaatcattttcttatattcccccgcattatgacaccagattcgttgaaa
cgtttgcgcgagtggttcagggcgaacgcggcagaattgccgtggagacctgcgggcttg
gacgcgccccgtgatccatatgctgtatggattagcgagacgatgttgcagcaaacgcaa
gtttcgacggtcagggattattttacgcgatggatgaagcggttcccggacgtggaagca
ctggccaaggcggaagaagccgaggttttcaagtactggcagggacttggttattacagc
cgcgctaggaacattttaaagacagcgaaaatagtcgcagcgcttcggcaagcccaggaa
ccttgcaaaatgcccgagacgcgcaaggaactggaagcattgccaggaatcggggcatac
acagcaggtgctattttaagcctagcctaccaccaacgagaagcgattttggatgggaat
ctcgtcaggatttttagccgtttgtacgagcttgattttttgccgacagataaaggttcc
gcaaataaaaattgcactgagatttattgggaatatgcgcgggaagtggcggattctccg
aaggcgtacatgcataacgaagcgttaatggagcttgggcgaacagtctgcaagacgaaa
tcgccactttgcgaaacatgtccgctacgcggcgaatgccgcgcattccaagagtgccgc
acaactgaatttccgcccgccaaaaagcgcaccgaaaaaagctggcatggaaccgtactt
gtagttgagagtgcggacgaaaaaatcttagctgtgaatggcggacaaaaattcttggac
aagcagcttgcgctcccacattttgaaagtgctcgccacgccactgtagcactccccgcc
aaagcagaagattacatcaacgccgacgaagtcaaatccgttgaatattgcgggacgttc
cgccacagcattacggtgcataaaatcgaatgcgacgtgttgcacgtgcaacttttgaca
aaagcaaaggcttcgcatttgccaacagaaaacagcgacaagcccaccgcatttgaatgg
atagaaaaagcgaaagcctttgagaccttcgcgaatagtttcagcttaaaagcgttaaaa
aaagtgttttgttaa
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