KEGG   Francisella tularensis subsp. holarctica FTNF002-00: FTA_0498
Entry
FTA_0498          CDS       T00584                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
fta  Francisella tularensis subsp. holarctica FTNF002-00
Pathway
fta03030  DNA replication
fta03430  Mismatch repair
fta03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FTA_0498 (dnaE)
   03430 Mismatch repair
    FTA_0498 (dnaE)
   03440 Homologous recombination
    FTA_0498 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fta03032]
    FTA_0498 (dnaE)
   03400 DNA repair and recombination proteins [BR:fta03400]
    FTA_0498 (dnaE)
Enzymes [BR:fta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FTA_0498 (dnaE)
DNA replication proteins [BR:fta03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FTA_0498 (dnaE)
DNA repair and recombination proteins [BR:fta03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FTA_0498 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ABU60974
LinkDB
Position
447613..451092
AA seq 1159 aa
MISHLRVHTGYSVVDSTVRLGDLFARAKDKNIVAVALTDVCNLFAAVKFYKQALASGIKP
IFGVELKVDTEFGICDLVLLAENNQGYQNIVKLVSKAYQEADRFGSIPLIPKFWLSEVKL
ESVICLNGGQQGELGKAILAKDYIKADEIIKQNIEIFGTNNYIIEIHKLEYENEGLYNEK
ALEYASKYNLIAVATNLTVFMEADDYDIHEIRACINEKTTILDESRKSKFTKEQYLKSAD
EMYETFSALPVLVDNTLAIAKRCNVTFELGKPCLPTVNIPAGLTEKEYFSKLCYQGLDKR
LEKILENRSADKHEHIIKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKESVAQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YEEVQADEDVAEIIEKAQKLEGLPRSLGKHAAGIVISPTKISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIINNTVKSINAKRPADQKPLDIADIPLDDQKTFKLLQA
GNTTGIFQLESQGMRQIVKDLGTSNFEEIIALVALYRPGPMENIPTFIDRKHGRKQITYL
HPLLEGVLKETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEKQRKIFKE
GAAKHHNIDTKLVDEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDCKNMGITVLAPNVNKSVYDCIAVSKGTILLGLGAIKGLGGEAIKS
ILTERDIAGEFSSIFDLCRRVDLRKVNKKALEALCYAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMNAAGQDDLFGFTEQESDTDAELERECIVEEWNLKELLINEKKALGMYFSGHII
DEESHWRNHVSFSDLEKIQQPNMDGNSVRIIASMITPPARRKTKTGRVLYIINIDDEFDR
ADCLISEEVFASVKDSIEVDDIVVVEGKVSRDVQRECNKLSVDKVQPISQYIDENFSKVE
LTLRSQNINPTNLKKVLSNLKENIASTNIQKQNILEITVSLGDVDGKFDYLQKPFSIYKF
VNDVSKLIAEGSTVSLSGV
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgatttctcatcttagagttcataccggatattctgttgttgatagtacagtgcgccta
ggcgatctttttgcaagagcaaaagataaaaatattgttgcagtagctcttactgatgta
tgtaatttatttgctgcagttaagttttataaacaagctttagctagtgggattaagcca
atctttggagttgagctaaaggtcgatactgaatttggcatatgtgatttagtattatta
gcggagaataatcaaggttatcaaaatattgttaaactagtctcaaaagcatatcaagaa
gctgataggtttggttcaattcctcttatacctaaattttggcttagcgaggtaaaacta
gaaagtgtcatttgcttaaatggtggtcaacaaggagagttaggcaaagctatcttagct
aaagactatatcaaagcagatgagattattaaacaaaatattgagatattcgggactaat
aactatatcattgagattcataagttagagtatgagaatgaaggtttgtataatgaaaaa
gctctagaatacgcaagtaagtacaatctcatagctgtagcaacaaacttaactgtattt
atggaagcagatgattatgatattcatgaaattagagcctgtatcaatgagaagacaaca
atattagatgagtcgcgtaaatctaaatttactaaagaacaatatctaaaatcagctgat
gaaatgtatgaaactttctctgcactgccagtacttgtagataatacactagcaattgct
aagcgttgtaatgtcacatttgagttaggtaagccgtgtttaccgactgtcaatattcca
gctggtttaacagaaaaagagtacttttcaaaactgtgctatcaaggtttagataagcgt
ttagaaaaaattctagaaaataggtcagctgataagcatgaacatatcataaaagtctat
aaagataggctacaacgagaaattgatatcatttgtgatatgggtttcccaggatacttt
ctgattgtcgaagattttatccgctggtcaaaagaaaatgatatccctgttggaccaggt
cgcggttctggtgctggttcattggtggcgtattctttgttaattactgatatagatcca
ttaccttatggattactttttgagaggtttttgaatcctgaaagagtatcaatgccagat
tttgatatagatttttgtattcaaggtagagatagggttatcaagtatgttgagcaaaaa
tatggcaaagagagtgtcgcacagattattacctatggtacgatggctgctaaaggtgtt
gtgcgtgatgttgtacgggtaatgggccaaagttttggttttggtgataggattgcgaag
ttaataccagaaacaccggggacaacatttaagaaaattcttcatgaaggtgagccattg
tatgaggaagtgcaagcagatgaggacgttgccgaaattatcgagaaggctcaaaaactt
gaaggtttgccgcgtagcttaggtaagcatgctgctggaattgtgatatcaccgacaaaa
atttctgattttgcacctgtgtattgtgaggataagggtggagatattgtaacgcaattt
gataaaggtgatgttgaagatgttggtctggttaaatttgactttttaggactaaaaaac
ttaacgatcatcaataatactgttaaaagcattaatgctaaaagaccagctgatcaaaaa
cctttagatatcgctgatatacctttagatgatcaaaaaacatttaagctgttacaagct
ggtaatactacggggatatttcagcttgagtctcaaggtatgcgtcagattgtcaaagac
cttggtacttctaattttgaggagattattgctctagtagcgttatatcgtccgggaccg
atggagaatatcccaacatttattgatcgtaagcatggtagaaaacagattacttacttg
catccgttacttgaaggagtactaaaagaaacttatggtattccagtatatcaagagcag
gttatgcagatggcacaaaaacttgcaggctatactcttggtggcgcagacttattacgc
cgtgctatgggtaagaaaaaacctgaagagatggagaaacagcgtaaaatcttcaaagaa
ggtgccgctaaacatcataatattgataccaagcttgttgacgagatatttgaccaaatg
gaggcttttgctggttatggttttaacaaatcacatgctgctgcatatgccttgattgcg
tatcaaacagcttggttaaaagcacattatccagatgaatatatggctgcccttatgtct
ggagatatggggaatactgatcagctcgttaaatttatcctagattgtaaaaatatgggt
atcacagttctagcacctaatgtaaacaaaagtgtctatgactgtatagctgtctcaaaa
ggaacgatcttgcttggcttaggagctatcaaggggcttggtggtgaggctatcaaaagt
atacttacagagagagatatagctggagagtttagctctatatttgatttatgtcgcagg
gttgatttacgcaaagttaataaaaaagcgcttgaagcactatgttatgcaggcgctatc
aaagatatctctaaaaatagagcaacagcatttaactctatcgaaaaagccatcaaaaat
gctggttatgtcaatgagatgaatgctgctgggcaggatgatttatttggttttacagag
caagagagtgatactgatgcagaactagagagagaatgtatagtagaagagtggaatctc
aaagagttgcttattaatgagaaaaaagctttaggaatgtatttctcaggacatattatt
gacgaggagagccactggcgcaatcatgttagctttagcgaccttgaaaaaattcaacaa
cctaatatggatggtaattccgtaagaattatcgcaagtatgataactccaccagcaaga
cgtaaaactaagactggtcgggttttatatattatcaatattgatgatgagtttgataga
gcagattgtttgattagtgaagaggtttttgctagtgttaaagatagtatcgaggttgat
gatattgttgttgtagagggcaaagttagtcgtgatgtgcaacgagaatgtaataagcta
agtgtagataaagttcaaccaatatcacaatatattgatgaaaattttagtaaagttgaa
ctaacattaagaagtcaaaatataaatcctactaatctcaaaaaagttctcagtaatctc
aaagaaaatatagcctcaaccaatatccaaaaacaaaatattttagaaataacggtttct
cttggtgatgttgatggtaagtttgattacttacaaaagccattttctatctacaaattt
gtcaatgatgttagcaagctaatagctgagggtagcacagttagtttgagtggggtttaa

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