Francisella tularensis subsp. tularensis TIGB03: FTU_1417
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Entry
FTU_1417 CDS
T01762
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ftg
Francisella tularensis subsp. tularensis TIGB03
Pathway
ftg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FTU_1417 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftg03400
]
FTU_1417 (recB)
Enzymes [BR:
ftg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FTU_1417 (recB)
DNA repair and recombination proteins [BR:
ftg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FTU_1417 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Lys
Cucumo_coat
Helicase_RecD
AAA_12
bMERB_dom
Motif
Other DBs
NCBI-ProteinID:
AFB79430
LinkDB
All DBs
Position
complement(1514513..1518166)
Genome browser
AA seq
1217 aa
AA seq
DB search
MDNLNANTITLQGRHIIEASAGTGKTFNITKLYIRLLLEKKLLPSNILVMTFTKDATQEI
IGRVEKEIRDVLASYTDEKKESDKENYKHLKRSLLEIDEAAIFTIHGFCKKVLSEQAFAS
GIEMDVSMEVDTSDILQKVVEDFFRKHINKSETNFGYLQIYKLHTPEKFLDDLENIIRSN
YEILTKQAISLDEFKILKKQQLELFINNHDIVDDFLSKLGKGELQGKRVDEYYRVLEWLK
LDNQTLFPENISIITDGRKISAKLIKPIFIGIKELRDLQQEIKQAQAAQFIRKACLQIRQ
DFAKAKEQKGVLDFDDLITKLCQSVKKSPELVKTLQKQYPVALIDEFQDTDAEQYEILDT
IYPLKNSSSHSHEGRNLLTNGLNLKDTRLREYDSSSDQNDSNLLLLMIGDPKQAIYGFRG
GDIFTYLKAKDSCPEENQWSMDTNWRSTGEMIKAYNRLFYKQDYQPEEEGQIGTNIFSDG
IGYQLVKASPDADKKTKDFDDNFKPINYFYYEVAEDDNKSDIDTNLSLWTVNEITRLLNT
QKVAENDIAILVENGKQAKIIQQALQAKNLSSVYLSQRDNVYHSQEAKEILALMEGINDL
ENKSMLKRALSTSLLGGRADKFISYIDENDVSAWDDEIEKAKSLRQQWHKYGFMTFIMQI
IHENFTQRADSKERIITNILHLAELIKVAENKYKHSNQLIKWYRHQLNNTATSEGELRLE
SDDNLIKIITIHGSKGLEYSVVFIPFACYASTKKFETSNFTKYYDGDLKQTVYKIGKDDS
VKQQADKEVIEELMRLFYVAVTRAEHRCYIGVAKYNNSEKSPLARFLGYQKDDDWLEKIQ
SITANPANQSLLINIADMREFSLKNLSSKDKNSDYDTLKANYISKLENDSWEMLSFSKIS
KSKVQNTALEKEIDEAEDDKTQASDRKLAFRFTASKGADMGNILHNVLEHTDFSLDEIDG
NLLQEQMDRYKVVAAEDFDNLKLWLEECLEAHIPYIDTSFSSSNESIQYGLFDIKDKGFC
LKTIPNSKTLKEAEFYFPVKNENLYKTNILEILQEYRELTKLKTYSHSYVGGNLPTNYQD
LRDTRLREYGNLTNVSNQKIFGMLHGFIDLIFEYEGKFYVADYKSNYLGDTLEDYNQQAM
QEKNQSSFYDLQYLIYSVALDKYLRQNIESYNYEKHFGGVYYFYLRGMKDGYGVYRARPN
LEIINKLASLFNGDDNV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctaaacgcaaacacaataactctacaaggtcgccatattatcgaggcaagt
gctggtactggtaagacttttaatattactaagttgtatatccgacttttgctagaaaaa
aaattattgccaagtaatatccttgtaatgacctttaccaaagatgcaacccaagagatt
attggtagagttgaaaaagagattcgagatgtattagcaagttatacagatgagaaaaag
gagtctgacaaagaaaactacaaacatctaaaaagatcattacttgagatagatgaggca
gctatatttactatccatggtttttgtaaaaaagtcttaagtgagcaagcctttgctagc
ggtatcgagatggatgtctctatggaggttgatacttcagatattttgcaaaaggttgta
gaggattttttcagaaaacatatcaataaaagcgaaactaattttggatatttacaaata
tataaattacatactccagagaaatttttagatgaccttgagaatattattaggtctaat
tatgagattttaacaaagcaagctataagcttagatgaatttaagatactcaaaaaacaa
cagttagaattatttattaataatcacgatatcgtagatgatttcttatctaaattagga
aaaggtgagctacagggcaagagagtagatgagtattatagggttttagaatggttgaaa
ttagataatcaaacactattcccagagaatatttctataattacagatggcagaaagata
agtgcaaaactaataaaaccaatttttattggcataaaagaattaagagacctgcaacaa
gaaataaaacaagcacaagcagcacaatttatcagaaaagcatgcttgcaaatccgccaa
gattttgcaaaggcaaaagagcaaaagggtgttttagactttgatgatttgattaccaag
ctttgccaaagtgtcaaaaaatcgccagagttagtcaaaactttgcaaaaacaatatcca
gttgctcttatagatgagtttcaagatactgatgctgagcagtatgagatattagatact
atttatcctttgaagaatagtagtagtcattcccacgaaggtaggaatctccttaccaat
ggattaaatttaaaagatacccgtttacgcgagtatgacagtagttctgatcagaacgat
agcaatcttctgctcttaatgataggagatccaaaacaggcaatttatggctttagaggc
ggagatatcttcacatatctaaaagctaaagatagttgtccagaagaaaatcaatggagt
atggacaccaactggcgttcaactggagagatgataaaagcttataatagacttttttat
aaacaagattatcagccagaagaagaggggcaaattggaactaatatttttagtgatggt
attggatatcagcttgtcaaagcttcaccggatgctgataaaaaaacaaaagattttgac
gataattttaaacctattaattatttctattatgaagtagccgaagatgataataaaagt
gatattgatacgaatttatcattatggacagtaaatgaaattactagattactaaataca
caaaaagtagcagaaaatgatatagctattttggtagaaaatggcaaacaggcaaagatt
atccaacaagctttgcaagctaaaaatctaagctcagtatacctaagccagcgcgataat
gtctatcacagtcaagaggctaaagagatcttagctcttatggagggtataaatgatctt
gaaaataaatctatgttgaaaagggcattatcgactagtttactcggtggtagagctgat
aagtttattagctatattgatgaaaatgatgtctcagcttgggatgatgagatagaaaaa
gccaaatctctaaggcaacaatggcataaatatggatttatgacatttattatgcagatt
atacatgagaatttcactcaaagagcagattcaaaagagcgtattattacaaatattctt
catttagcagaacttattaaagtggctgagaataaatataaacactctaatcaactcatt
aaatggtatcgccaccaactcaacaatacagctacaagtgagggtgaacttagattagaa
agtgatgacaacttgattaagataattacaatccatggatcaaaaggacttgagtattca
gttgtgtttatcccgtttgcttgctatgcaagcacaaagaagtttgagacaagtaatttt
actaaatattatgatggtgacctaaaacaaactgtctacaaaattggcaaagatgatagt
gtgaaacagcaagctgataaagaggttatagaagaattaatgcgtctattttatgtagct
gttacgcgtgcagagcatagatgttatattggggttgcaaaatataataatagcgaaaag
tcaccattagcaagattcttaggttatcaaaaagatgatgattggttagagaagatccaa
agcataacagcaaatcctgctaatcaaagtctactgataaatattgcagatatgcgggaa
tttagtttaaaaaatttatctagcaaagataaaaactctgattatgatactctcaaagca
aattatattagtaaactagaaaatgatagttgggagatgttatctttctcaaaaatatca
aagtcaaaagttcaaaatactgcattagaaaaagaaattgacgaggcagaagatgataaa
actcaagcttcagacagaaagctagcatttagatttacagcttcaaaaggagctgatatg
ggtaatattctgcataatgttttagagcatacagattttagtttagatgagatagatggt
aatcttttacaagaacaaatggatagatataaagtagttgctgcagaagacttcgataat
cttaaattatggttggaagaatgtttagaagcacatataccttatatagataccagtttt
tctagctcaaatgagagtattcaatatggtttatttgatatcaaggataaaggcttttgc
ttaaaaactatcccaaattcgaaaactctaaaagaggcggagttttattttcctgttaaa
aatgagaatttgtataaaacaaatatattagaaatcttgcaagagtatagagagcttaca
aaactgaagacatatagtcattcctacgtaggtgggaatcttccaactaactaccaagat
ctaagagatacccgcctccgcgagtatggcaatttaactaatgtttcgaatcaaaaaatt
tttggtatgcttcatggttttatagatcttatttttgagtatgagggtaaattttatgtt
gctgattataaatcaaattatctaggtgatactttagaagattataatcagcaggcgatg
caagagaaaaatcaaagtagcttttatgatttacagtatctaatatatagcgttgccttg
gataagtacctgcgacaaaacattgaaagttataattatgaaaagcattttggcggagta
tattatttttatcttagaggtatgaaagatggttatggagtttatcgagctagaccaaat
ttagagattatcaacaaacttgctagtttatttaatggagatgataatgtataa
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