Granulosicoccus antarcticus: IMCC3135_06765
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Entry
IMCC3135_06765 CDS
T04938
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gai03032
]
IMCC3135_06765 (topA)
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_06765 (topA)
Enzymes [BR:
gai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IMCC3135_06765 (topA)
DNA replication proteins [BR:
gai03032
]
Prokaryotic type
DNA Topoisomerases
IMCC3135_06765 (topA)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IMCC3135_06765 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ASJ71460
UniProt:
A0A2Z2NRU0
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All DBs
Position
complement(1546682..1549171)
Genome browser
AA seq
829 aa
AA seq
DB search
MSKNLVIVESPAKGKTIEKYLGKDYKVLASYGHVRDLLPKEGAVDPDNDFAMKYQMIERN
EKHVAAIKKALKKADNLLLATDPDREGEAISWHLVEHLRETGDLEGKHVERVVFHEITKK
AVQEAVDNPRELGYDLVNAQQARRALDYLVGFNLSPLLWRKIRRGLSAGRVQSPALRMIC
ERENEIEAFIPQEYWSVLAELEKNTQPFTARLSLLNGEKVKQFTVNNGELANSTRDMLLS
NANGTLTAVKVEKKQRKRNPTAPFTTSTLQQEASRKLGFGAQRTMRTAQKLYEGIKIGEE
GPTGLITYMRTDSITLSQECLDELRELIPKRFGKEYLPEAINVYKNKSKNAQEAHEAIRP
SSVMRAPDEIKQFLEEDQYKLYNLIWKRTVASQMIFATIDQVAVDFACGEGNLFRATGST
IHFPGFMTVYKEDEDDKKKSDDDEKVLPEMKEGDQVPLQDIKLTQHFTEPPPRFSEASLV
KTLEEYGIGRPSTYASIISTLQSREYVEIESRRFFPTDTGRVVATFLAKHFDKYVDYDFT
ANLEDELDAVSRGEKDWVPLLAEFWKPFKEQVDDKLENVSKDEAIQARELGTDEESGKPI
TVRIGQYGAFVQIGTRDDEDKPKFAGLRPGQRMNTITLEQAIQLFDLPRDLGESAEGEKI
TANIGRFGPYIKYASKFVSLKEDDPYTVTLERALEIVAEKKIADANKLVKEFEGTDIQIL
NGRWGAYITDGSKNAKIPKELKETPAAIDLETCQKLLAEAPERRGRGKKKAVAKKTEATA
KKKAVAKKKTKKKSASKKKSAASKKKSAASKKAAAKKKAAASSDSSKAE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaatctggtcattgttgagtcccctgccaagggcaagacgatcgagaagtat
ctgggcaaggactacaaggtactggcctcttatggccatgttcgcgacctgttgcccaag
gaaggcgctgtcgatcccgataacgacttcgccatgaagtaccagatgatcgagcgcaac
gagaaacacgttgccgccatcaagaaggccttgaagaaagctgacaacctgcttctcgca
acggatccggatcgcgagggtgaggccatcagctggcatctggtcgagcatctacgtgaa
acgggcgatctggaaggcaaacacgttgagcgtgtggtctttcacgaaattaccaaaaag
gcagtccaggaggctgtcgataacccgcgcgaactcggttatgacctggttaacgcgcaa
caggcgcgtcgtgcactggactacctggttggtttcaacctgtcgccattgttgtggcgc
aagattcgtcgtggcttgtcagcgggacgcgtgcagtctcccgcattgcgcatgatctgc
gagcgtgagaacgagatcgaagccttcattccccaggaatactggagcgtgctggccgaa
ctggaaaaaaacacacagcccttcaccgcccgtctgtctctgctcaacggcgagaaggtc
aagcagttcaccgtcaacaatggcgaactggccaactcgactcgcgatatgttgctgagc
aatgccaatggcacgctcacggccgtcaaggtcgagaagaaacagcgtaaacgcaacccg
acagcaccgttcaccacctcgactctgcagcaggaagcgtcacgaaaactcggatttggt
gctcagcgaaccatgcgcaccgcccagaaactatacgaaggtataaaaattggtgaggaa
ggccccaccggtttgatcacctatatgcgtaccgactccattacgctgtctcaggaatgc
cttgacgaattgcgggagctgataccaaaacgctttggcaaggaatacctgcccgaggca
atcaacgtctacaagaacaaatccaagaatgcgcaggaagcgcacgaggcgattcgccct
tcatcggtgatgcgcgcccccgacgagatcaagcaatttctcgaagaagatcagtacaag
ctctataacctgatctggaaacgaaccgtcgctagccagatgatcttcgccaccatcgac
caggttgccgtggatttcgcctgcggtgaaggcaatctgtttcgcgctaccggttcgact
atccacttccccggtttcatgaccgtctacaaggaagatgaggacgacaagaaaaagtct
gacgacgatgagaaagtgttgccagagatgaaggaaggcgaccaggtcccgttgcaggac
atcaaactgacacagcatttcactgagcctccgccgcgcttctctgaggcaagcctggtc
aagacgctggaagaatatggaattggacgaccgtcaacctatgcctccatcatttccacg
ctgcagtcacgagaatatgtggaaattgaaagtcgccgcttcttcccgaccgatacgggt
cgagtggtcgcaacgtttcttgccaagcatttcgacaagtacgtggactacgactttacg
gccaatctggaagatgagctggatgccgtatcacgtggcgagaaagactgggtgcccttg
ttggctgagttctggaaacctttcaaggaacaggtagacgacaagctggagaacgtctcg
aaggatgaggccattcaggcccgtgaactcggaacagacgaagaatccggtaagccgatc
accgttcgcattggtcagtacggtgcgtttgtccagatcggtacccgcgatgatgaggac
aagcccaagttcgcagggctgcgtcccggtcaacgcatgaacaccatcacactggaacaa
gccattcagctattcgacctgccccgagatctgggtgaatctgctgaaggtgagaaaatc
acggccaatattggtcggtttggtccctatatcaaatacgcctccaagttcgtatcgctc
aaggaagacgatccttacaccgtaacgctggaacgggcactggagatcgtcgccgagaag
aagattgctgatgccaacaagctggtcaaggagtttgaaggcaccgacattcagatactc
aatggtcgctggggcgcctatatcaccgacggcagcaagaacgcaaaaatccccaaagaa
ttgaaagagaccccggcagcgattgatctggagacctgccagaaactgctggccgaagcg
ccagagcggcgcggtcgcggcaagaagaaagctgtagccaagaagacagaggccactgcc
aagaaaaaagcggtcgcaaagaagaagaccaagaagaaaagcgccagcaaaaagaaaagc
gccgccagcaagaaaaaaagtgctgccagtaaaaaagctgcagccaagaaaaaagccgca
gcctccagtgatagctccaaggctgagtga
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