Geobacter anodireducens: A2G06_12065
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Entry
A2G06_12065 CDS
T04399
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gao
Geobacter anodireducens
Pathway
gao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A2G06_12065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gao03019
]
A2G06_12065
03009 Ribosome biogenesis [BR:
gao03009
]
A2G06_12065
Enzymes [BR:
gao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A2G06_12065
Messenger RNA biogenesis [BR:
gao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A2G06_12065
Ribosome biogenesis [BR:
gao03009
]
Prokaryotic type
rRNA processing factors
A2G06_12065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ANA40884
LinkDB
All DBs
Position
2639242..2641701
Genome browser
AA seq
819 aa
AA seq
DB search
MAKKMLINVMHPEESRVAIVEDGKLVDLDIEIEGSEQTRGNVYKGVVVRVEPGLQAAFVD
IGLKRLGFLQMGEIHPSFWQWRSDIPEENHSRRPRIQEVVRRGQELIVQVEKGERDMKGA
ALTTYMSFPGRYMVLMPGSDSAGISRKVESESDRKKLKEKVAELEIPEGYGYIVRTEALG
KTKTELAKDLQYLVKLHQGIVDKAAAAKGPTLLHRELDVVIRTIRDYFTAEIDEVLVDSK
DVYKQAREFFKQTMPKHEKLVKLHTEKRPIFSRYQIEEQIDLIYEKKVPLKSGGYLIIEP
TEALVSIDVNSGKTTGEKGVEDTAYKTNLEAAEEAARQLRMRDLGGLIVLDFIDMRDKKH
ITTVEKTLKAALKGDKARVTVGRISQFGMLEMSRQRIRQTLEQGSTLECPHCGGRGKVKS
VENMALSFLRKVHAAAAKGTVAEVHGGLPLEVAYYLLNRKKRELAQIENEYDIVVTVKGK
TSFLMNQLELELVRREKPAHVETHEEHVEKVAETHAEALTEAVEEVAVLAEPPAAEAEGK
KKKRRRSRRKGKAEAEEMAESATSAEAEENGETEAGGEEEPEVAGGEETTEGGAPAEEAK
RKRRRKRRRGKKAKADESVTDEASVQEAAEETEETEETEEVSAETEAVGTPATAEEAGEA
SEEVKKKRRRRKHRSPKRGDGETEAPAAELEPAEAQGAGPEPEPAAVEAPLEGAEPALKK
TRAPRTRKKAAEVPEQAEPVASLPGEKQAPAVAEATPAPPAEPKPAKKRATRKKAAVEPA
PDPSQSPAPEPAADEPPKKKRATRKKKETPAEEEAPEAV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaaatgctcatcaacgtgatgcatccggaagaatcacgcgtcgccatcgtt
gaagacggcaagctggtcgatctggacatcgaaatcgaggggagcgaacagacccgaggc
aatgtctacaagggggtggtggtccgggttgaaccgggactgcaggccgccttcgtcgac
atcggactgaaacggctcggcttcctccagatgggggaaatccacccctcgttctggcaa
tggcgcagcgacatccccgaagagaaccacagccgccgcccccgcatccaggaagtcgtc
cgccgggggcaggagctcatcgtccaggtggaaaagggcgaacgggacatgaagggagcg
gccctgaccacctacatgtcgtttccgggccgctacatggtgctcatgcccggcagcgac
tcggcgggcatctcccgcaaggtggagagcgagtccgaccggaagaagctcaaggaaaag
gtggccgagctggagatccccgagggttacggctacatcgtccgaaccgaggccctgggc
aagaccaagacggaactggccaaggatctccagtacctggtaaagctccaccagggcatc
gtggacaaggcggccgccgccaagggccccaccctcctccaccgggaactggacgtggtc
atccgcaccatccgcgactacttcaccgccgagatcgacgaagtgctggtggacagcaag
gacgtctacaagcaggcccgcgaattcttcaagcagaccatgcccaagcacgaaaagctg
gtgaagctccacacggaaaagcgccccatcttctcccgctaccagatcgaagagcagatc
gacctcatctacgagaaaaaagtccccctcaaatcgggcggctacctcatcatcgaaccc
accgaggccctggtgtccatcgacgtcaactcaggcaagaccaccggcgagaagggggtc
gaagacaccgcctacaagaccaatctcgaagcggccgaagaggctgcgcggcaactgcgg
atgcgcgacctgggcgggctcatcgtgctcgacttcatcgacatgcgggacaagaagcac
atcaccaccgtggaaaagaccctgaaggcggccctcaagggtgacaaggcccgggtgacg
gtggggcgcatttcccagttcggcatgctggagatgtcgcgccagcggatccgccagacc
ctcgaacagggcagcaccctggaatgtccccactgcggcgggcggggcaaggtgaagagc
gtggagaacatggccctctcctttctgcgcaaggtccacgccgcggcagccaaggggacc
gtggccgaggtgcacggcgggcttcccctggaggtcgcctattacctgctgaaccgcaag
aagagggaactggcccagatcgagaacgagtacgacatcgtcgtgaccgttaagggcaag
acctcgttcctgatgaaccaactggagctggagttggtcaggcgcgaaaaaccggcccac
gtggaaacccacgaagagcacgtggaaaaggtggccgagacacatgccgaagctctgacc
gaagccgtcgaagaagtcgcggtcctggccgaaccgccggcggccgaggccgagggcaag
aagaagaaacggcgccgcagccgccggaagggcaaggccgaagccgaagagatggctgaa
tccgcgacgtctgccgaagcggaggaaaacggtgagaccgaagccggcggcgaagaggag
ccggaggtcgcagggggcgaagaaacaacggaaggcggtgccccggcggaagaagccaag
aggaagcggcggcgcaagcggcggcgcggcaagaaggcgaaagcggacgaatccgtgacc
gacgaggcttcagttcaggaagccgccgaagagacagaagagacagaagagacagaagaa
gtatccgccgagacggaagcggtcggaactccggcgaccgccgaagaagccggggaggca
tcggaagaggttaagaagaaacggcgtcgccgcaagcaccggagcccgaaacgcggcgac
ggggaaaccgaggcgccggcagcggaacttgagccggcagaggcccagggtgccgggcct
gaaccggaaccagccgctgtcgaagcgccccttgaaggcgccgaacccgctttgaaaaaa
acgcgcgcgccacgcacccgcaaaaaagcggccgaagtccctgagcaggccgagccggtc
gcatctctccccggagagaagcaggcgccggccgttgctgaagcgacccctgccccgccg
gccgagcctaagccggcaaagaagcgggccacgcgtaaaaaggccgccgttgagccggcg
ccggatccatcgcagtcccctgcgccggaaccggccgctgacgaaccgcccaagaaaaaa
cgggccacgcgtaaaaagaaagaaacgccggcagaagaggaagcgccggaagcagtatag
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