KEGG   Geobacter anodireducens: A2G06_12065
Entry
A2G06_12065       CDS       T04399                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
gao  Geobacter anodireducens
Pathway
gao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A2G06_12065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gao03019]
    A2G06_12065
   03009 Ribosome biogenesis [BR:gao03009]
    A2G06_12065
Enzymes [BR:gao01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     A2G06_12065
Messenger RNA biogenesis [BR:gao03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A2G06_12065
Ribosome biogenesis [BR:gao03009]
 Prokaryotic type
  rRNA processing factors
   A2G06_12065
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 Anti-TRAP DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: ANA40884
LinkDB
Position
2639242..2641701
AA seq 819 aa
MAKKMLINVMHPEESRVAIVEDGKLVDLDIEIEGSEQTRGNVYKGVVVRVEPGLQAAFVD
IGLKRLGFLQMGEIHPSFWQWRSDIPEENHSRRPRIQEVVRRGQELIVQVEKGERDMKGA
ALTTYMSFPGRYMVLMPGSDSAGISRKVESESDRKKLKEKVAELEIPEGYGYIVRTEALG
KTKTELAKDLQYLVKLHQGIVDKAAAAKGPTLLHRELDVVIRTIRDYFTAEIDEVLVDSK
DVYKQAREFFKQTMPKHEKLVKLHTEKRPIFSRYQIEEQIDLIYEKKVPLKSGGYLIIEP
TEALVSIDVNSGKTTGEKGVEDTAYKTNLEAAEEAARQLRMRDLGGLIVLDFIDMRDKKH
ITTVEKTLKAALKGDKARVTVGRISQFGMLEMSRQRIRQTLEQGSTLECPHCGGRGKVKS
VENMALSFLRKVHAAAAKGTVAEVHGGLPLEVAYYLLNRKKRELAQIENEYDIVVTVKGK
TSFLMNQLELELVRREKPAHVETHEEHVEKVAETHAEALTEAVEEVAVLAEPPAAEAEGK
KKKRRRSRRKGKAEAEEMAESATSAEAEENGETEAGGEEEPEVAGGEETTEGGAPAEEAK
RKRRRKRRRGKKAKADESVTDEASVQEAAEETEETEETEEVSAETEAVGTPATAEEAGEA
SEEVKKKRRRRKHRSPKRGDGETEAPAAELEPAEAQGAGPEPEPAAVEAPLEGAEPALKK
TRAPRTRKKAAEVPEQAEPVASLPGEKQAPAVAEATPAPPAEPKPAKKRATRKKAAVEPA
PDPSQSPAPEPAADEPPKKKRATRKKKETPAEEEAPEAV
NT seq 2460 nt   +upstreamnt  +downstreamnt
atggcaaaaaaaatgctcatcaacgtgatgcatccggaagaatcacgcgtcgccatcgtt
gaagacggcaagctggtcgatctggacatcgaaatcgaggggagcgaacagacccgaggc
aatgtctacaagggggtggtggtccgggttgaaccgggactgcaggccgccttcgtcgac
atcggactgaaacggctcggcttcctccagatgggggaaatccacccctcgttctggcaa
tggcgcagcgacatccccgaagagaaccacagccgccgcccccgcatccaggaagtcgtc
cgccgggggcaggagctcatcgtccaggtggaaaagggcgaacgggacatgaagggagcg
gccctgaccacctacatgtcgtttccgggccgctacatggtgctcatgcccggcagcgac
tcggcgggcatctcccgcaaggtggagagcgagtccgaccggaagaagctcaaggaaaag
gtggccgagctggagatccccgagggttacggctacatcgtccgaaccgaggccctgggc
aagaccaagacggaactggccaaggatctccagtacctggtaaagctccaccagggcatc
gtggacaaggcggccgccgccaagggccccaccctcctccaccgggaactggacgtggtc
atccgcaccatccgcgactacttcaccgccgagatcgacgaagtgctggtggacagcaag
gacgtctacaagcaggcccgcgaattcttcaagcagaccatgcccaagcacgaaaagctg
gtgaagctccacacggaaaagcgccccatcttctcccgctaccagatcgaagagcagatc
gacctcatctacgagaaaaaagtccccctcaaatcgggcggctacctcatcatcgaaccc
accgaggccctggtgtccatcgacgtcaactcaggcaagaccaccggcgagaagggggtc
gaagacaccgcctacaagaccaatctcgaagcggccgaagaggctgcgcggcaactgcgg
atgcgcgacctgggcgggctcatcgtgctcgacttcatcgacatgcgggacaagaagcac
atcaccaccgtggaaaagaccctgaaggcggccctcaagggtgacaaggcccgggtgacg
gtggggcgcatttcccagttcggcatgctggagatgtcgcgccagcggatccgccagacc
ctcgaacagggcagcaccctggaatgtccccactgcggcgggcggggcaaggtgaagagc
gtggagaacatggccctctcctttctgcgcaaggtccacgccgcggcagccaaggggacc
gtggccgaggtgcacggcgggcttcccctggaggtcgcctattacctgctgaaccgcaag
aagagggaactggcccagatcgagaacgagtacgacatcgtcgtgaccgttaagggcaag
acctcgttcctgatgaaccaactggagctggagttggtcaggcgcgaaaaaccggcccac
gtggaaacccacgaagagcacgtggaaaaggtggccgagacacatgccgaagctctgacc
gaagccgtcgaagaagtcgcggtcctggccgaaccgccggcggccgaggccgagggcaag
aagaagaaacggcgccgcagccgccggaagggcaaggccgaagccgaagagatggctgaa
tccgcgacgtctgccgaagcggaggaaaacggtgagaccgaagccggcggcgaagaggag
ccggaggtcgcagggggcgaagaaacaacggaaggcggtgccccggcggaagaagccaag
aggaagcggcggcgcaagcggcggcgcggcaagaaggcgaaagcggacgaatccgtgacc
gacgaggcttcagttcaggaagccgccgaagagacagaagagacagaagagacagaagaa
gtatccgccgagacggaagcggtcggaactccggcgaccgccgaagaagccggggaggca
tcggaagaggttaagaagaaacggcgtcgccgcaagcaccggagcccgaaacgcggcgac
ggggaaaccgaggcgccggcagcggaacttgagccggcagaggcccagggtgccgggcct
gaaccggaaccagccgctgtcgaagcgccccttgaaggcgccgaacccgctttgaaaaaa
acgcgcgcgccacgcacccgcaaaaaagcggccgaagtccctgagcaggccgagccggtc
gcatctctccccggagagaagcaggcgccggccgttgctgaagcgacccctgccccgccg
gccgagcctaagccggcaaagaagcgggccacgcgtaaaaaggccgccgttgagccggcg
ccggatccatcgcagtcccctgcgccggaaccggccgctgacgaaccgcccaagaaaaaa
cgggccacgcgtaaaaagaaagaaacgccggcagaagaggaagcgccggaagcagtatag

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