Gilliamella apicola: GAPWK_1415
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Entry
GAPWK_1415 CDS
T03066
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
gap
Gilliamella apicola
Pathway
gap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GAPWK_1415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gap03400
]
GAPWK_1415
DNA repair and recombination proteins [BR:
gap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GAPWK_1415
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
HHH
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
AHN25990
UniProt:
L0AR76
LinkDB
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Position
complement(1529810..1531645)
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AA seq
611 aa
AA seq
DB search
MSQFNSASFLKTVPHKPGIYQMFNDKQTIIYVGKAKDLNNRLKSYFNSSKKTLKTDRLVS
HIHHVEFTITNTETEALLLEQTYIKKYQPRYNVLLKDDKSYPFIKLSKERHPQLSLYRGA
INRKKDEFFGPYPSGYAVKQILALLQKTFPIRQCLDSTYRNRTRPCLQYQIKRCLGPCVP
GLVSDEDYNEQVNYVRLFLSGRSEQIIQKITEDMHKASSELNFEKAAALRDQLQAIKHIN
EKQAIYNNNDNLDVIGFHYESGLACIYVLFIRNGQTFGHRSYFPKVPSNTELEEVIETFL
GQFYLQGNQNRNIPQKILLNFSLSDKQAMEETLSIIAEHQVKLVDEPKGDNLKLLNIATV
NAQTAVKNKLLENSTIKQRYDALKAFLGIDKINRMECFDISHFMGKNTIASCVVFDENGP
VKSEFRRYNITDITPGDDYAAMEQVLRRRYNKKDLADEKVPDIIFIDGGKGQLNQALQVF
EQLDVNWNKNHPILIGVAKGAERKEGLETLFFEAHGTGHYLDDRSPALLLIQQIRNASHD
HAIVGQRKKGTKQLTDSALEHINGVGAKRRKALLNHFGGLRELKNASIDEIAQVQGISKP
LAEKIYLNLQQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattcaattcagcatcatttttaaaaacagtcccacataaaccgggcatttat
caaatgttcaatgataaacagaccattatttatgtgggaaaagccaaagatctcaataac
cgattaaaaagctattttaacagtagtaaaaaaacacttaaaacagacaggctagtcagc
catattcatcatgttgaatttacaattaccaacaccgaaactgaagctttactactagaa
cagacttacatcaaaaaatatcagcctcgttataatgtattattaaaagatgataagagc
tatccatttataaagcttagtaaagaacgccatccacaattatcactttatcgtggcgca
attaatcgaaaaaaagatgagttttttggtccttatccgagtggatatgcagttaaacag
attttagccctactacaaaaaacctttccgattagacaatgtttggatagtacttatcgc
aatcgtactcgtccatgtttgcaataccaaattaaacgttgtttaggtccatgtgtacca
ggattagttagcgatgaagattataatgaacaagttaattatgttagattatttttgtct
ggacgatcagagcagattatccaaaaaataactgaagatatgcataaagcaagtagcgag
cttaactttgaaaaagccgcagcattacgtgatcagttacaagccataaaacatattaat
gaaaaacaagctatatataataataatgataatcttgatgtcattggattccattatgag
tcgggtttagcttgtatttatgttttgtttatccgcaatgggcaaacttttggtcaccgc
tcttatttccctaaagtgccttcaaatactgagctcgaagaagttattgaaaccttttta
ggtcaattttatctgcaaggtaatcaaaatagaaatattcctcaaaagattttattaaat
ttttcattatcagataaacaagcaatggaagaaactttatctatcattgcagagcatcaa
gttaaattagttgatgaacctaaaggcgataatctaaaattacttaatattgctactgtt
aatgcacaaacagcagtcaaaaataagctattagaaaattcaaccataaaacaacgatat
gatgcgcttaaggcatttttagggattgataaaatcaatcgcatggaatgctttgatatc
agtcattttatgggtaaaaatacaatagcgtcttgtgtagtatttgatgaaaatggtcca
gtcaaatctgaatttcgtcgctataatataacagacattactccgggtgatgattatgct
gcgatggagcaagtattgaggcgtcgttacaataaaaaagatctagcagatgaaaaagtt
cctgatattatcttcattgatggtggtaaaggtcaacttaatcaagcattacaagtattt
gagcagttagatgtaaattggaataaaaatcatccaattttaatcggtgtggctaaaggc
gcagaaagaaaagaaggtcttgaaacactattttttgaagcacatggtacaggtcattat
cttgatgatcgctccccagctctattacttattcaacaaatacgtaatgcatctcatgat
catgctattgtgggacaacgtaaaaaagggacaaaacagcttacggatagtgcattagag
catattaatggtgtgggggcaaaaagaagaaaagcacttttaaatcattttggtggatta
agagagttaaaaaatgccagtattgatgaaatagcccaagtacaaggtatttctaaacca
ttagctgaaaaaatttatctaaatttacaacaataa
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